diff --git a/HISTORY.md b/HISTORY.md
index 27b4ae002..2a77b03c5 100644
--- a/HISTORY.md
+++ b/HISTORY.md
@@ -38,6 +38,7 @@
 * `DB::Open()` is not going be blocked by obsolete file purge if `DBOptions::avoid_unnecessary_blocking_io` is set to true.
 * In builds where glibc provides `gettid()`, info log ("LOG" file) lines now print a system-wide thread ID from `gettid()` instead of the process-local `pthread_self()`. For all users, the thread ID format is changed from hexadecimal to decimal integer.
 * In builds where glibc provides `pthread_setname_np()`, the background thread names no longer contain an ID suffix. For example, "rocksdb:bottom7" (and all other threads in the `Env::Priority::BOTTOM` pool) are now named "rocksdb:bottom". Previously large thread pools could breach the name size limit (e.g., naming "rocksdb:bottom10" would fail).
+* Deprecating `ReadOptions::iter_start_seqnum` and `DBOptions::preserve_deletes`, please try using user defined timestamp feature instead. The options will be removed in a future release, currently it logs a warning message when using.
 
 ### Performance Improvements
 * Released some memory related to filter construction earlier in `BlockBasedTableBuilder` for `FullFilter` and `PartitionedFilter` case (#9070)
diff --git a/db/db_impl/db_impl.cc b/db/db_impl/db_impl.cc
index 4ed47d224..190ad54b2 100644
--- a/db/db_impl/db_impl.cc
+++ b/db/db_impl/db_impl.cc
@@ -2903,6 +2903,13 @@ Iterator* DBImpl::NewIterator(const ReadOptions& read_options,
   }
   // if iterator wants internal keys, we can only proceed if
   // we can guarantee the deletes haven't been processed yet
+  if (read_options.iter_start_seqnum > 0 &&
+      !iter_start_seqnum_deprecation_warned_.exchange(true)) {
+    ROCKS_LOG_WARN(
+        immutable_db_options_.info_log,
+        "iter_start_seqnum is deprecated, will be removed in a future release. "
+        "Please try using user-defined timestamp instead.");
+  }
   if (immutable_db_options_.preserve_deletes &&
       read_options.iter_start_seqnum > 0 &&
       read_options.iter_start_seqnum < preserve_deletes_seqnum_.load()) {
diff --git a/db/db_impl/db_impl.h b/db/db_impl/db_impl.h
index f06a0c7c2..4b55fbfbf 100644
--- a/db/db_impl/db_impl.h
+++ b/db/db_impl/db_impl.h
@@ -2321,6 +2321,10 @@ class DBImpl : public DB {
 
   // Pointer to WriteBufferManager stalling interface.
   std::unique_ptr<StallInterface> wbm_stall_;
+
+  // Indicate if deprecation warning message is logged before. Will be removed
+  // soon with the deprecated feature.
+  std::atomic_bool iter_start_seqnum_deprecation_warned_{false};
 };
 
 extern Options SanitizeOptions(const std::string& db, const Options& src,
diff --git a/db/db_impl/db_impl_open.cc b/db/db_impl/db_impl_open.cc
index 365747925..f3c9dc9e3 100644
--- a/db/db_impl/db_impl_open.cc
+++ b/db/db_impl/db_impl_open.cc
@@ -200,6 +200,13 @@ DBOptions SanitizeOptions(const std::string& dbname, const DBOptions& src,
                    "file size check will be skipped during open.");
   }
 
+  if (result.preserve_deletes) {
+    ROCKS_LOG_WARN(
+        result.info_log,
+        "preserve_deletes is deprecated, will be removed in a future release. "
+        "Please try using user-defined timestamp instead.");
+  }
+
   return result;
 }
 
diff --git a/include/rocksdb/options.h b/include/rocksdb/options.h
index 84e9071c0..f593e1243 100644
--- a/include/rocksdb/options.h
+++ b/include/rocksdb/options.h
@@ -1209,16 +1209,9 @@ struct DBOptions {
   // Immutable.
   bool allow_ingest_behind = false;
 
-  // Needed to support differential snapshots.
-  // If set to true then DB will only process deletes with sequence number
-  // less than what was set by SetPreserveDeletesSequenceNumber(uint64_t ts).
-  // Clients are responsible to periodically call this method to advance
-  // the cutoff time. If this method is never called and preserve_deletes
-  // is set to true NO deletes will ever be processed.
-  // At the moment this only keeps normal deletes, SingleDeletes will
-  // not be preserved.
+  // Deprecated, will be removed in a future release.
+  // Please try using user-defined timestamp instead.
   // DEFAULT: false
-  // Immutable (TODO: make it dynamically changeable)
   bool preserve_deletes = false;
 
   // If enabled it uses two queues for writes, one for the ones with
@@ -1557,10 +1550,8 @@ struct ReadOptions {
   // Default: empty (every table will be scanned)
   std::function<bool(const TableProperties&)> table_filter;
 
-  // Needed to support differential snapshots. Has 2 effects:
-  // 1) Iterator will skip all internal keys with seqnum < iter_start_seqnum
-  // 2) if this param > 0 iterator will return INTERNAL keys instead of
-  //    user keys; e.g. return tombstones as well.
+  // Deprecated, will be removed in a future release.
+  // Please try using user-defined timestamp instead.
   // Default: 0 (don't filter by seqnum, return user keys)
   SequenceNumber iter_start_seqnum;