Commit Graph

11 Commits

Author SHA1 Message Date
Zhichao Cao
4369f2c7bb Checksum for each SST file and stores in MANIFEST (#6216)
Summary:
In the current code base, RocksDB generate the checksum for each block and verify the checksum at usage. Current PR enable SST file checksum. After a SST file is generated by Flush or Compaction, RocksDB generate the SST file checksum and store the checksum value and checksum method name in the vs_info and MANIFEST as part for the FileMetadata.

Added the enable_sst_file_checksum to Options to enable or disable file checksum. Added sst_file_checksum to Options such that user can plugin their own SST file checksum calculate method via overriding the SstFileChecksum class. The checksum information inlcuding uint32_t checksum value and a checksum name (string).  A new tool is added to LDB such that user can dump out a list of file checksum information from MANIFEST. If user enables the file checksum but does not provide the sst_file_checksum instance, RocksDB will use the default crc32checksum implemented in table/sst_file_checksum_crc32c.h
Pull Request resolved: https://github.com/facebook/rocksdb/pull/6216

Test Plan: Added the testing case in table_test and ldb_cmd_test to verify checksum is correct in different level. Pass make asan_check.

Differential Revision: D19171461

Pulled By: zhichao-cao

fbshipit-source-id: b2e53479eefc5bb0437189eaa1941670e5ba8b87
2020-02-10 15:52:52 -08:00
Peter Dillinger
4b86fe1123 Log warning for high bits/key in legacy Bloom filter (#6312)
Summary:
Help users that would benefit most from new Bloom filter
implementation by logging a warning that recommends the using
format_version >= 5.
Pull Request resolved: https://github.com/facebook/rocksdb/pull/6312

Test Plan:
$ (for BPK in 10 13 14 19 20 50; do ./filter_bench -quick -impl=0 -bits_per_key=$BPK -m_queries=1 2>&1; done) | grep 'its/key'
    Bits/key actual: 10.0647
    Bits/key actual: 13.0593
    [WARN] [/block_based/filter_policy.cc:546] Using legacy Bloom filter with high (14) bits/key. Significant filter space and/or accuracy improvement is available with format_verion>=5.
    Bits/key actual: 14.0581
    [WARN] [/block_based/filter_policy.cc:546] Using legacy Bloom filter with high (19) bits/key. Significant filter space and/or accuracy improvement is available with format_verion>=5.
    Bits/key actual: 19.0542
    [WARN] [/block_based/filter_policy.cc:546] Using legacy Bloom filter with high (20) bits/key. Dramatic filter space and/or accuracy improvement is available with format_verion>=5.
    Bits/key actual: 20.0584
    [WARN] [/block_based/filter_policy.cc:546] Using legacy Bloom filter with high (50) bits/key. Dramatic filter space and/or accuracy improvement is available with format_verion>=5.
    Bits/key actual: 50.0577

Differential Revision: D19457191

Pulled By: pdillinger

fbshipit-source-id: 073d94cde5c70e03a160f953e1100c15ea83eda4
2020-01-17 19:37:35 -08:00
Zhichao Cao
cddd637997 Merge adjacent file block reads in RocksDB MultiGet() and Add uncompressed block to cache (#6089)
Summary:
In the current MultiGet, if the KV-pairs do not belong to the data blocks in the block cache, multiple blocks are read from a SST. It will trigger one block read for each block request and read them in parallel. In some cases, if some data blocks are adjacent in the SST, the reads for these blocks can be combined to a single large read, which can reduce the system calls and reduce the read latency if possible.

Considering to fill the block cache, if multiple data blocks are in the same memory buffer, we need to copy them to the heap separately. Therefore, only in the case that 1) data block compression is enabled, and 2) compressed block cache is null, we can do combined read. Otherwise, extra memory copy is needed, which may cause extra overhead. In the current case, data blocks will be uncompressed to a new memory space.

Also, in the case that 1) data block compression is enabled, and 2) compressed block cache is null, it is possible the data block is actually not compressed. In the current logic, these data blocks will not be added to the uncompressed_cache. So if memory buffer is shared and the data block is not compressed, the data block are copied to the head and fill the cache.
Pull Request resolved: https://github.com/facebook/rocksdb/pull/6089

Test Plan: Added test case to ParallelIO.MultiGet. Pass make asan_check

Differential Revision: D18734668

Pulled By: zhichao-cao

fbshipit-source-id: 67c5615ed373e51e42635fd74b36f8f3a66d5da4
2019-12-16 16:26:03 -08:00
sdong
a68dff5c35 Apply formatter to some recent commits (#6138)
Summary:
Formatter somehow complains some recent lines changed. Apply them to make the formatter happy.
Pull Request resolved: https://github.com/facebook/rocksdb/pull/6138

Test Plan: See CI passes.

Differential Revision: D18895950

fbshipit-source-id: 7d1696cf3e3a682bc10a30cdca748a23c6565255
2019-12-09 15:49:49 -08:00
Ziyue Yang
7e2f831924 Fix wrong ExtractUserKey usage in BlockBasedTableBuilder::EnterUnbuff… (#6100)
Summary:
BlockBasedTableBuilder uses ExtractUserKey in EnterUnbuffered. This would
cause index filter building error, since user-provided timestamp is supported
by ExtractUserKeyAndStripTimestamp, and it's used in Add. This commit changes
ExtractUserKey to ExtractUserKeyAndStripTimestamp.

A test case is also added by modifying DBBasicTestWithTimestampWithParam_
PutAndGet test in db_basic_test to cover ExtractUserKeyAndStripTimestamp usage
in both kBuffered and kUnbuffered state of BlockBasedTableBuilder.

Before the ExtractUserKeyAndStripTimstamp fix:

```
$ ./db_basic_test --gtest_filter="*PutAndGet*"
Note: Google Test filter = *PutAndGet*
[==========] Running 2 tests from 1 test case.
[----------] Global test environment set-up.
[----------] 2 tests from Timestamp/DBBasicTestWithTimestampWithParam
[ RUN      ] Timestamp/DBBasicTestWithTimestampWithParam.PutAndGet/0
db/db_basic_test.cc:2109: Failure
db_->Get(ropts, cfh, "key" + std::to_string(j), &value)
NotFound:
db/db_basic_test.cc:2109: Failure
db_->Get(ropts, cfh, "key" + std::to_string(j), &value)
NotFound:
db/db_basic_test.cc:2109: Failure
db_->Get(ropts, cfh, "key" + std::to_string(j), &value)
NotFound:
db/db_basic_test.cc:2109: Failure
db_->Get(ropts, cfh, "key" + std::to_string(j), &value)
NotFound:
db/db_basic_test.cc:2109: Failure
db_->Get(ropts, cfh, "key" + std::to_string(j), &value)
NotFound:
[  FAILED  ] Timestamp/DBBasicTestWithTimestampWithParam.PutAndGet/0, where GetParam() = false (1177 ms)
[ RUN      ] Timestamp/DBBasicTestWithTimestampWithParam.PutAndGet/1
[       OK ] Timestamp/DBBasicTestWithTimestampWithParam.PutAndGet/1 (1056 ms)
[----------] 2 tests from Timestamp/DBBasicTestWithTimestampWithParam (2233 ms total)

[----------] Global test environment tear-down
[==========] 2 tests from 1 test case ran. (2233 ms total)
[  PASSED  ] 1 test.
[  FAILED  ] 1 test, listed below:
[  FAILED  ] Timestamp/DBBasicTestWithTimestampWithParam.PutAndGet/0, where GetParam() = false

 1 FAILED TEST
```

After the ExtractUserKeyAndStripTimstamp fix:

```
$ ./db_basic_test --gtest_filter="*PutAndGet*"
Note: Google Test filter = *PutAndGet*
[==========] Running 2 tests from 1 test case.
[----------] Global test environment set-up.
[----------] 2 tests from Timestamp/DBBasicTestWithTimestampWithParam
[ RUN      ] Timestamp/DBBasicTestWithTimestampWithParam.PutAndGet/0
[       OK ] Timestamp/DBBasicTestWithTimestampWithParam.PutAndGet/0 (1417 ms)
[ RUN      ] Timestamp/DBBasicTestWithTimestampWithParam.PutAndGet/1
[       OK ] Timestamp/DBBasicTestWithTimestampWithParam.PutAndGet/1 (1041 ms)
[----------] 2 tests from Timestamp/DBBasicTestWithTimestampWithParam (2458 ms total)

[----------] Global test environment tear-down
[==========] 2 tests from 1 test case ran. (2458 ms total)
[  PASSED  ] 2 tests.
```
Pull Request resolved: https://github.com/facebook/rocksdb/pull/6100

Differential Revision: D18769654

Pulled By: riversand963

fbshipit-source-id: 76c2cf2c9a5e0d85db95d98e812e6af0c2a15c6b
2019-12-09 10:57:02 -08:00
Peter Dillinger
ca3b6c28c9 Expose and elaborate FilterBuildingContext (#6088)
Summary:
This change enables custom implementations of FilterPolicy to
wrap a variety of NewBloomFilterPolicy and select among them based on
contextual information such as table level and compaction style.

* Moves FilterBuildingContext to public API and elaborates it with more
useful data. (It would be nice to put more general options-like data,
but at the time this object is constructed, we are using internal APIs
ImmutableCFOptions and MutableCFOptions and don't have easy access to
ColumnFamilyOptions that I can tell.)

* Renames BloomFilterPolicy::GetFilterBitsBuilderInternal to
GetBuilderWithContext, because it's now public.

* Plumbs through the table's "level_at_creation" for filter building
context.

* Simplified some tests by adding GetBuilder() to
MockBlockBasedTableTester.

* Adds test as DBBloomFilterTest.ContextCustomFilterPolicy, including
sample wrapper class LevelAndStyleCustomFilterPolicy.

* Fixes a cross-test bug in DBBloomFilterTest.OptimizeFiltersForHits
where it does not reset perf context.
Pull Request resolved: https://github.com/facebook/rocksdb/pull/6088

Test Plan: make check, valgrind on db_bloom_filter_test

Differential Revision: D18697817

Pulled By: pdillinger

fbshipit-source-id: 5f987a2d7b07cc7a33670bc08ca6b4ca698c1cf4
2019-11-26 18:24:10 -08:00
Peter Dillinger
f059c7d9b9 New Bloom filter implementation for full and partitioned filters (#6007)
Summary:
Adds an improved, replacement Bloom filter implementation (FastLocalBloom) for full and partitioned filters in the block-based table. This replacement is faster and more accurate, especially for high bits per key or millions of keys in a single filter.

Speed

The improved speed, at least on recent x86_64, comes from
* Using fastrange instead of modulo (%)
* Using our new hash function (XXH3 preview, added in a previous commit), which is much faster for large keys and only *slightly* slower on keys around 12 bytes if hashing the same size many thousands of times in a row.
* Optimizing the Bloom filter queries with AVX2 SIMD operations. (Added AVX2 to the USE_SSE=1 build.) Careful design was required to support (a) SIMD-optimized queries, (b) compatible non-SIMD code that's simple and efficient, (c) flexible choice of number of probes, and (d) essentially maximized accuracy for a cache-local Bloom filter. Probes are made eight at a time, so any number of probes up to 8 is the same speed, then up to 16, etc.
* Prefetching cache lines when building the filter. Although this optimization could be applied to the old structure as well, it seems to balance out the small added cost of accumulating 64 bit hashes for adding to the filter rather than 32 bit hashes.

Here's nominal speed data from filter_bench (200MB in filters, about 10k keys each, 10 bits filter data / key, 6 probes, avg key size 24 bytes, includes hashing time) on Skylake DE (relatively low clock speed):

$ ./filter_bench -quick -impl=2 -net_includes_hashing # New Bloom filter
Build avg ns/key: 47.7135
Mixed inside/outside queries...
  Single filter net ns/op: 26.2825
  Random filter net ns/op: 150.459
    Average FP rate %: 0.954651
$ ./filter_bench -quick -impl=0 -net_includes_hashing # Old Bloom filter
Build avg ns/key: 47.2245
Mixed inside/outside queries...
  Single filter net ns/op: 63.2978
  Random filter net ns/op: 188.038
    Average FP rate %: 1.13823

Similar build time but dramatically faster query times on hot data (63 ns to 26 ns), and somewhat faster on stale data (188 ns to 150 ns). Performance differences on batched and skewed query loads are between these extremes as expected.

The only other interesting thing about speed is "inside" (query key was added to filter) vs. "outside" (query key was not added to filter) query times. The non-SIMD implementations are substantially slower when most queries are "outside" vs. "inside". This goes against what one might expect or would have observed years ago, as "outside" queries only need about two probes on average, due to short-circuiting, while "inside" always have num_probes (say 6). The problem is probably the nastily unpredictable branch. The SIMD implementation has few branches (very predictable) and has pretty consistent running time regardless of query outcome.

Accuracy

The generally improved accuracy (re: Issue https://github.com/facebook/rocksdb/issues/5857) comes from a better design for probing indices
within a cache line (re: Issue https://github.com/facebook/rocksdb/issues/4120) and improved accuracy for millions of keys in a single filter from using a 64-bit hash function (XXH3p). Design details in code comments.

Accuracy data (generalizes, except old impl gets worse with millions of keys):
Memory bits per key: FP rate percent old impl -> FP rate percent new impl
6: 5.70953 -> 5.69888
8: 2.45766 -> 2.29709
10: 1.13977 -> 0.959254
12: 0.662498 -> 0.411593
16: 0.353023 -> 0.0873754
24: 0.261552 -> 0.0060971
50: 0.225453 -> ~0.00003 (less than 1 in a million queries are FP)

Fixes https://github.com/facebook/rocksdb/issues/5857
Fixes https://github.com/facebook/rocksdb/issues/4120

Unlike the old implementation, this implementation has a fixed cache line size (64 bytes). At 10 bits per key, the accuracy of this new implementation is very close to the old implementation with 128-byte cache line size. If there's sufficient demand, this implementation could be generalized.

Compatibility

Although old releases would see the new structure as corrupt filter data and read the table as if there's no filter, we've decided only to enable the new Bloom filter with new format_version=5. This provides a smooth path for automatic adoption over time, with an option for early opt-in.
Pull Request resolved: https://github.com/facebook/rocksdb/pull/6007

Test Plan: filter_bench has been used thoroughly to validate speed, accuracy, and correctness. Unit tests have been carefully updated to exercise new and old implementations, as well as the logic to select an implementation based on context (format_version).

Differential Revision: D18294749

Pulled By: pdillinger

fbshipit-source-id: d44c9db3696e4d0a17caaec47075b7755c262c5f
2019-11-13 16:44:01 -08:00
Peter Dillinger
ca7ccbe2ea Misc hashing updates / upgrades (#5909)
Summary:
- Updated our included xxhash implementation to version 0.7.2 (== the latest dev version as of 2019-10-09).
- Using XXH_NAMESPACE (like other fb projects) to avoid potential name collisions.
- Added fastrange64, and unit tests for it and fastrange32. These are faster alternatives to hash % range.
- Use preview version of XXH3 instead of MurmurHash64A for NPHash64
-- Had to update cache_test to increase probability of passing for any given hash function.
- Use fastrange64 instead of % with uses of NPHash64
-- Had to fix WritePreparedTransactionTest.CommitOfDelayedPrepared to avoid deadlock apparently caused by new hash collision.
- Set default seed for NPHash64 because specifying a seed rarely makes sense for it.
- Removed unnecessary include xxhash.h in a popular .h file
- Rename preview version of XXH3 to XXH3p for clarity and to ease backward compatibility in case final version of XXH3 is integrated.

Relying on existing unit tests for NPHash64-related changes. Each new implementation of fastrange64 passed unit tests when manipulating my local build to select it. I haven't done any integration performance tests, but I consider the improved performance of the pieces being swapped in to be well established.
Pull Request resolved: https://github.com/facebook/rocksdb/pull/5909

Differential Revision: D18125196

Pulled By: pdillinger

fbshipit-source-id: f6bf83d49d20cbb2549926adf454fd035f0ecc0d
2019-10-24 17:16:46 -07:00
Yanqin Jin
340ed4fac7 Add support for timestamp in Get/Put (#5079)
Summary:
It's useful to be able to (optionally) associate key-value pairs with user-provided timestamps. This PR is an early effort towards this goal and continues the work of facebook#4942. A suite of new unit tests exist in DBBasicTestWithTimestampWithParam. Support for timestamp requires the user to provide timestamp as a slice in `ReadOptions` and `WriteOptions`. All timestamps of the same database must share the same length, format, etc. The format of the timestamp is the same throughout the same database, and the user is responsible for providing a comparator function (Comparator) to order the <key, timestamp> tuples. Once created, the format and length of the timestamp cannot change (at least for now).

Test plan (on devserver):
```
$COMPILE_WITH_ASAN=1 make -j32 all
$./db_basic_test --gtest_filter=Timestamp/DBBasicTestWithTimestampWithParam.PutAndGet/*
$make check
```
All tests must pass.

We also run the following db_bench tests to verify whether there is regression on Get/Put while timestamp is not enabled.
```
$TEST_TMPDIR=/dev/shm ./db_bench -benchmarks=fillseq,readrandom -num=1000000
$TEST_TMPDIR=/dev/shm ./db_bench -benchmarks=fillrandom -num=1000000
```
Repeat for 6 times for both versions.

Results are as follows:
```
|        | readrandom | fillrandom |
| master | 16.77 MB/s | 47.05 MB/s |
| PR5079 | 16.44 MB/s | 47.03 MB/s |
```
Pull Request resolved: https://github.com/facebook/rocksdb/pull/5079

Differential Revision: D15132946

Pulled By: riversand963

fbshipit-source-id: 833a0d657eac21182f0f206c910a6438154c742c
2019-06-05 23:10:47 -07:00
Siying Dong
8843129ece Move some memory related files from util/ to memory/ (#5382)
Summary:
Move arena, allocator, and memory tools under util to a separate memory/ directory.
Pull Request resolved: https://github.com/facebook/rocksdb/pull/5382

Differential Revision: D15564655

Pulled By: siying

fbshipit-source-id: 9cd6b5d0d3d52b39606e19221fa154596e5852a5
2019-05-30 17:44:09 -07:00
Vijay Nadimpalli
50e470791d Organizing rocksdb/table directory by format
Summary: Pull Request resolved: https://github.com/facebook/rocksdb/pull/5373

Differential Revision: D15559425

Pulled By: vjnadimpalli

fbshipit-source-id: 5d6d6d615582bedd96a4b879bb25d429a6de8b55
2019-05-30 14:51:11 -07:00