Commit Graph

3643 Commits

Author SHA1 Message Date
Yi Wu
2730fe693e Fix ingested file and direcotry not being sync (#5435)
Summary:
It it not safe to assume application had sync the SST file before ingest it into DB. Also the directory to put the ingested file needs to be fsync, otherwise the file can be lost. For integrity of RocksDB we need to sync the ingested file and directory before apply the change to manifest.

Also syncing after writing global sequence when write_global_seqno=true was removed in https://github.com/facebook/rocksdb/issues/4172. Adding it back.

Fixes https://github.com/facebook/rocksdb/issues/5287.
Pull Request resolved: https://github.com/facebook/rocksdb/pull/5435

Test Plan:
Test ingest file with ldb command and observe fsync/fdatasync in strace output. Tried both move_files=true and move_files=false.
https://gist.github.com/yiwu-arbug/650a4023f57979056d83485fa863bef9

More test suggestions are welcome.

Differential Revision: D15941675

Pulled By: riversand963

fbshipit-source-id: 389533f3923065a96df2cdde23ff4724a1810d78
2019-06-21 10:15:38 -07:00
haoyuhuang
705b8eecb4 Add more callers for table reader. (#5454)
Summary:
This PR adds more callers for table readers. These information are only used for block cache analysis so that we can know which caller accesses a block.
1. It renames the BlockCacheLookupCaller to TableReaderCaller as passing the caller from upstream requires changes to table_reader.h and TableReaderCaller is a more appropriate name.
2. It adds more table reader callers in table/table_reader_caller.h, e.g., kCompactionRefill, kExternalSSTIngestion, and kBuildTable.

This PR is long as it requires modification of interfaces in table_reader.h, e.g., NewIterator.
Pull Request resolved: https://github.com/facebook/rocksdb/pull/5454

Test Plan: make clean && COMPILE_WITH_ASAN=1 make check -j32.

Differential Revision: D15819451

Pulled By: HaoyuHuang

fbshipit-source-id: b6caa704c8fb96ddd15b9a934b7e7ea87f88092d
2019-06-20 14:31:48 -07:00
Zhongyi Xie
24f73436fb sanitize and limit block_size under 4GB (#5492)
Summary:
`Block::restart_index_`, `Block::restarts_`, and `Block::current_` are defined as uint32_t but  `BlockBasedTableOptions::block_size` is defined as a size_t so user might see corruption as in https://github.com/facebook/rocksdb/issues/5486.
This PR adds a check in `BlockBasedTableFactory::SanitizeOptions` to disallow such configurations.
yiwu-arbug
Pull Request resolved: https://github.com/facebook/rocksdb/pull/5492

Differential Revision: D15914047

Pulled By: miasantreble

fbshipit-source-id: c943f153d967e15aee7f2795730ab8259e2be201
2019-06-20 11:45:08 -07:00
Vijay Nadimpalli
24b118ad98 Combine the read-ahead logic for user reads and compaction reads (#5431)
Summary:
Currently the read-ahead logic for user reads and compaction reads go through different code paths where compaction reads create new table readers and use `ReadaheadRandomAccessFile`. This change is to unify read-ahead logic to use read-ahead in BlockBasedTableReader::InitDataBlock(). As a result of the change  `ReadAheadRandomAccessFile` class and `new_table_reader_for_compaction_inputs` option will no longer be used.
Pull Request resolved: https://github.com/facebook/rocksdb/pull/5431

Test Plan:
make check

Here is the benchmarking - https://gist.github.com/vjnadimpalli/083cf423f7b6aa12dcdb14c858bc18a5

Differential Revision: D15772533

Pulled By: vjnadimpalli

fbshipit-source-id: b71dca710590471ede6fb37553388654e2e479b9
2019-06-19 14:10:46 -07:00
Simon Grätzer
fe90ed7a70 Replace Corruption with TryAgain status when new tail is not visible to TransactionLogIterator (#5474)
Summary:
When tailing the WAL with TransactionLogIterator, it used to return Corruption status to indicate that the WAL has new tail that is not visible to the iterator, which is a misleading status. The patch replaces it with TryAgain which is more descriptive of a status, indicating that the user needs to create a new iterator to fetch the recent tail.
Fixes https://github.com/facebook/rocksdb/issues/5455
Pull Request resolved: https://github.com/facebook/rocksdb/pull/5474

Differential Revision: D15898953

Pulled By: maysamyabandeh

fbshipit-source-id: 40966f6457cb539e1aeb104daeada6b0e46059fc
2019-06-19 08:10:08 -07:00
Yanqin Jin
f287f8dc93 Fix a bug caused by secondary not skipping the beginning of new MANIFEST (#5472)
Summary:
While the secondary is replaying after the primary, the primary may switch to a new MANIFEST. The secondary is already able to detect and follow the primary to the new MANIFEST. However, the current implementation has a bug, described as follows.
The new MANIFEST's first records have been generated by VersionSet::WriteSnapshot to describe the current state of the column families and the db as of the MANIFEST creation. Since the secondary instance has already finished recovering upon start, there is no need for the secondary to process these records. Actually, if the secondary were to replay these records, the secondary may end up adding the same SST files **again** to each column family, causing consistency checks done by VersionBuilder to fail. Therefore, we record the number of records to skip at the beginning of the new MANIFEST and ignore them.

Test plan (on dev server)
```
$make clean && make -j32 all
$./db_secondary_test
```
All existing unit tests must pass as well.
Pull Request resolved: https://github.com/facebook/rocksdb/pull/5472

Differential Revision: D15866771

Pulled By: riversand963

fbshipit-source-id: a1eec4837fb2ad13059398efb0f437e74fd53bed
2019-06-18 11:21:37 -07:00
Zhongyi Xie
ddd088c8b9 fix rocksdb lite and clang contrun test failures (#5477)
Summary:
recent commit 671d15cbdd introduced some test failures:
```
===== Running stats_history_test
[==========] Running 9 tests from 1 test case.
[----------] Global test environment set-up.
[----------] 9 tests from StatsHistoryTest
[ RUN      ] StatsHistoryTest.RunStatsDumpPeriodSec
monitoring/stats_history_test.cc:63: Failure
dbfull()->SetDBOptions({{"stats_dump_period_sec", "0"}})
Not implemented: Not supported in ROCKSDB LITE

db/db_options_test.cc:28:11: error: unused variable 'kMicrosInSec' [-Werror,-Wunused-const-variable]
const int kMicrosInSec = 1000000;
```
This PR fixes these failures
Pull Request resolved: https://github.com/facebook/rocksdb/pull/5477

Differential Revision: D15871814

Pulled By: miasantreble

fbshipit-source-id: 0a7023914d2c1784d9d2d3f5bfb47310d4855394
2019-06-17 21:16:29 -07:00
Yanqin Jin
7d8d56413d Override check consistency for DBImplSecondary (#5469)
Summary:
`DBImplSecondary` calls `CheckConsistency()` during open. In the past, `DBImplSecondary` did not override this function thus `DBImpl::CheckConsistency()` is called.
The following can happen. The secondary instance is performing consistency check which calls `GetFileSize(file_path)` but the file at `file_path` is deleted by the primary instance. `DBImpl::CheckConsistency` does not account for this and fails the consistency check. This is undesirable. The solution is that, we call `DBImpl::CheckConsistency()` first. If it passes, then we are good. If not, we give it a second chance and handles the case of file(s) being deleted.

Test plan (on dev server):
```
$make clean && make -j20 all
$./db_secondary_test
```
All other existing unit tests must pass as well.
Pull Request resolved: https://github.com/facebook/rocksdb/pull/5469

Differential Revision: D15861845

Pulled By: riversand963

fbshipit-source-id: 507d72392508caed3cd003bb2e2aa43f993dd597
2019-06-17 15:39:55 -07:00
Zhongyi Xie
671d15cbdd Persistent Stats: persist stats history to disk (#5046)
Summary:
This PR continues the work in https://github.com/facebook/rocksdb/pull/4748 and https://github.com/facebook/rocksdb/pull/4535 by adding a new DBOption `persist_stats_to_disk` which instructs RocksDB to persist stats history to RocksDB itself. When statistics is enabled, and  both options `stats_persist_period_sec` and `persist_stats_to_disk` are set, RocksDB will periodically write stats to a built-in column family in the following form: key -> (timestamp in microseconds)#(stats name), value -> stats value. The existing API `GetStatsHistory` will detect the current value of `persist_stats_to_disk` and either read from in-memory data structure or from the hidden column family on disk.
Pull Request resolved: https://github.com/facebook/rocksdb/pull/5046

Differential Revision: D15863138

Pulled By: miasantreble

fbshipit-source-id: bb82abdb3f2ca581aa42531734ac799f113e931b
2019-06-17 15:21:50 -07:00
Sagar Vemuri
f1219644ec Validate CF Options when creating a new column family (#5453)
Summary:
It seems like CF Options are not properly validated  when creating a new column family with `CreateColumnFamily` API; only a selected few checks are done. Calling `ColumnFamilyData::ValidateOptions`, which is the single source for all CFOptions validations,  will help fix this. (`ColumnFamilyData::ValidateOptions` is already called at the time of `DB::Open`).

**Test Plan:**
Added a new test: `DBTest.CreateColumnFamilyShouldFailOnIncompatibleOptions`
```
TEST_TMPDIR=/dev/shm ./db_test --gtest_filter=DBTest.CreateColumnFamilyShouldFailOnIncompatibleOptions
```
Also ran gtest-parallel to make sure the new test is not flaky.
```
TEST_TMPDIR=/dev/shm ~/gtest-parallel/gtest-parallel ./db_test --gtest_filter=DBTest.CreateColumnFamilyShouldFailOnIncompatibleOptions --repeat=10000
[10000/10000] DBTest.CreateColumnFamilyShouldFailOnIncompatibleOptions (15 ms)
```
Pull Request resolved: https://github.com/facebook/rocksdb/pull/5453

Differential Revision: D15816851

Pulled By: sagar0

fbshipit-source-id: 9e702b9850f5c4a7e0ef8d39e1e6f9b81e7fe1e5
2019-06-14 14:11:10 -07:00
haoyuhuang
bb4178066d Integrate block cache tracer into db_impl (#5433)
Summary:
This PR integrates the block cache tracer class into db_impl.cc.
db_impl.cc contains a member variable of AtomicBlockCacheTraceWriter class and passes its reference to the block_based_table_reader.
Pull Request resolved: https://github.com/facebook/rocksdb/pull/5433

Differential Revision: D15728016

Pulled By: HaoyuHuang

fbshipit-source-id: 23d5659e8c82d556833dcc1a5558aac8c1f7db71
2019-06-13 15:43:10 -07:00
Levi Tamasi
a3b8c76d8e Add missing check before calling PurgeObsoleteFiles in EnableFileDeletions (#5448)
Summary:
Calling PurgeObsoleteFiles with a JobContext for which HaveSomethingToDelete
is false is a precondition violation. This would trigger an assertion in debug builds;
however, in release builds with assertions disabled, this can result in the
pending_purge_obsolete_files_ counter in DBImpl underflowing, which in turn can lead
to the process hanging during database close.
Pull Request resolved: https://github.com/facebook/rocksdb/pull/5448

Differential Revision: D15792569

Pulled By: ltamasi

fbshipit-source-id: 82d92c9b4f6a9efcdc69dbb3d5a52a1ae2dd2472
2019-06-13 14:43:13 -07:00
Maysam Yabandeh
f43edff9ac Disable kPipelinedWrite in MultiThreaded (#5442)
Summary:
TSAN tests report a race condition. We temporarily exclude kPipelinedWrite from MultiThreaded until the race condition is fixed.
Pull Request resolved: https://github.com/facebook/rocksdb/pull/5442

Differential Revision: D15782349

Pulled By: maysamyabandeh

fbshipit-source-id: 42b4f9b3fa9137f0675e13ad132c0a06800c1bdd
2019-06-12 10:37:40 -07:00
Levi Tamasi
ba64a4cf52 Revert "Reduce iterator key comparison for upper/lower bound check (#5111)" (#5440)
Summary:
This reverts commit f3a7847598.
Pull Request resolved: https://github.com/facebook/rocksdb/pull/5440

Differential Revision: D15765967

Pulled By: ltamasi

fbshipit-source-id: d027fe24132e3729289cd7c01857a7eb449d9dd0
2019-06-11 16:23:41 -07:00
Yanqin Jin
7177dc46a1 Handle missing WAL in secondary mode (#5323)
Summary:
In secondary mode, it is possible that the secondary lists the primary's WAL
directory, finds a WAL and tries to open it. It is possible that the primary
deletes the WAL after secondary listing dir but before the secondary opening
it. Then the secondary will fail to open the WAL file with a PathNotFound
status. In this case, we can return OK without replaying WAL and optionally
replay more MANIFEST.

Test Plan (on my dev machine):
Without this PR, the following will fail several times out of 100 runs.
```
~/gtest-parallel/gtest-parallel -r 100 -w 16 ./db_secondary_test --gtest_filter=DBSecondaryTest.SwitchToNewManifestDuringOpen
```
With this PR, the above should always succeed.
Pull Request resolved: https://github.com/facebook/rocksdb/pull/5323

Differential Revision: D15763878

Pulled By: riversand963

fbshipit-source-id: c7164fa7cb8d9001abc258b6a2dc93613e4f38ff
2019-06-11 13:08:28 -07:00
sdong
58c4aee42e TransactionUtil::CheckKey() to skip unnecessary history (#4941)
Summary:
If a memtable definitely covers a key, there isn't a need to check older memtables.
We can skip them by checking the earliest sequence number.
Pull Request resolved: https://github.com/facebook/rocksdb/pull/4941

Differential Revision: D13932666

fbshipit-source-id: b9d52f234b8ad9dd3bf6547645cd457175a3ca9b
2019-06-11 11:46:42 -07:00
Levi Tamasi
a94aef6596 Fix DBTest.DynamicMiscOptions so it passes even with Snappy disabled (#5438)
Summary:
This affects our "no compression" automated tests. Since PR #5368, DBTest.DynamicMiscOptions has been failing with:

db/db_test.cc:4889: Failure
dbfull()->SetOptions({{"compression", "kSnappyCompression"}})
Invalid argument: Compression type Snappy is not linked with the binary.
Pull Request resolved: https://github.com/facebook/rocksdb/pull/5438

Differential Revision: D15752100

Pulled By: ltamasi

fbshipit-source-id: 3f19eff7cafc03b333965be0203c5853d2a9cb71
2019-06-10 18:47:58 -07:00
Maysam Yabandeh
c8c1a549f0 Avoid deadlock between mutex_ and log_write_mutex_ (#5437)
Summary:
To avoid deadlock mutex_ should never be acquired before log_write_mutex_. The patch documents that and also fixes one case in ::FlushWAL that acquires mutex_ through ::WriteStatusCheck when it already holds lock on log_write_mutex_.
Pull Request resolved: https://github.com/facebook/rocksdb/pull/5437

Differential Revision: D15749722

Pulled By: maysamyabandeh

fbshipit-source-id: f57b69c44b4b80cc6d7ddf3d3fdf4a9eb5a5a45a
2019-06-10 17:06:50 -07:00
Maysam Yabandeh
b2584577fa Remove global locks from FlushScheduler (#5372)
Summary:
FlushScheduler's methods are instrumented with debug-time locks to check the scheduler state against a simple container definition. Since https://github.com/facebook/rocksdb/pull/2286 the scope of such locks are widened to the entire methods' body. The result is that the concurrency tested during testing (in debug mode) is stricter than the concurrency level manifested at runtime (in release mode).
The patch reverts this change to reduce the scope of such locks.
Pull Request resolved: https://github.com/facebook/rocksdb/pull/5372

Differential Revision: D15545831

Pulled By: maysamyabandeh

fbshipit-source-id: 01d69191afb1dd807d4bdc990fc74813ae7b5426
2019-06-10 16:50:26 -07:00
Yanqin Jin
641cc8d541 Use CreateLoggerFromOptions function (#5427)
Summary:
Use `CreateLoggerFromOptions` function to reduce code duplication.

Test plan (on my machine)
```
$make clean && make -j32 db_secondary_test
$KEEP_DB=1 ./db_secondary_test
```
Verify all info logs of the secondary instance are properly logged.
Pull Request resolved: https://github.com/facebook/rocksdb/pull/5427

Differential Revision: D15748922

Pulled By: riversand963

fbshipit-source-id: bad7261df1b8373efc504f141efc7871e375a311
2019-06-10 16:00:30 -07:00
haoyuhuang
5efa0d6b0d Create a BlockCacheLookupContext to enable fine-grained block cache tracing. (#5421)
Summary:
BlockCacheLookupContext only contains the caller for now.
We will trace block accesses at five places:
1. BlockBasedTable::GetFilter.
2. BlockBasedTable::GetUncompressedDict.
3. BlockBasedTable::MaybeReadAndLoadToCache. (To trace access on data, index, and range deletion block.)
4. BlockBasedTable::Get. (To trace the referenced key and whether the referenced key exists in a fetched data block.)
5. BlockBasedTable::MultiGet. (To trace the referenced key and whether the referenced key exists in a fetched data block.)

We create the context at:
1. BlockBasedTable::Get. (kUserGet)
2. BlockBasedTable::MultiGet. (kUserMGet)
3. BlockBasedTable::NewIterator. (either kUserIterator, kCompaction, or external SST ingestion calls this function.)
4. BlockBasedTable::Open. (kPrefetch)
5. Index/Filter::CacheDependencies. (kPrefetch)
6. BlockBasedTable::ApproximateOffsetOf. (kCompaction or kUserApproximateSize).

I loaded 1 million key-value pairs into the database and ran the readrandom benchmark with a single thread. I gave the block cache 10 GB to make sure all reads hit the block cache after warmup. The throughput is comparable.
Throughput of this PR: 231334 ops/s.
Throughput of the master branch: 238428 ops/s.

Experiment setup:
RocksDB:    version 6.2
Date:       Mon Jun 10 10:42:51 2019
CPU:        24 * Intel Core Processor (Skylake)
CPUCache:   16384 KB
Keys:       20 bytes each
Values:     100 bytes each (100 bytes after compression)
Entries:    1000000
Prefix:    20 bytes
Keys per prefix:    0
RawSize:    114.4 MB (estimated)
FileSize:   114.4 MB (estimated)
Write rate: 0 bytes/second
Read rate: 0 ops/second
Compression: NoCompression
Compression sampling rate: 0
Memtablerep: skip_list
Perf Level: 1

Load command: ./db_bench --benchmarks="fillseq" --key_size=20 --prefix_size=20 --keys_per_prefix=0 --value_size=100 --statistics --cache_index_and_filter_blocks --cache_size=10737418240 --disable_auto_compactions=1 --disable_wal=1 --compression_type=none --min_level_to_compress=-1 --compression_ratio=1 --num=1000000

Run command: ./db_bench --benchmarks="readrandom,stats" --use_existing_db --threads=1 --duration=120 --key_size=20 --prefix_size=20 --keys_per_prefix=0 --value_size=100 --statistics --cache_index_and_filter_blocks --cache_size=10737418240 --disable_auto_compactions=1 --disable_wal=1 --compression_type=none --min_level_to_compress=-1 --compression_ratio=1 --num=1000000 --duration=120

TODOs:
1. Create a caller for external SST file ingestion and differentiate the callers for iterator.
2. Integrate tracer to trace block cache accesses.
Pull Request resolved: https://github.com/facebook/rocksdb/pull/5421

Differential Revision: D15704258

Pulled By: HaoyuHuang

fbshipit-source-id: 4aa8a55f8cb1576ffb367bfa3186a91d8f06d93a
2019-06-10 15:33:27 -07:00
Yanqin Jin
6ce5580882 Improve memtable earliest seqno assignment for secondary instance (#5413)
Summary:
In regular RocksDB instance, `MemTable::earliest_seqno_` is "db sequence number at the time of creation". However, we cannot use the db sequence number to set the value of `MemTable::earliest_seqno_` for secondary instance, i.e. `DBImplSecondary` due to the logic of MANIFEST and WAL replay.
When replaying the log files of the primary, the secondary instance first replays MANIFEST and updates the db sequence number if necessary. Next, the secondary replays WAL files, creates new memtables if necessary and inserts key-value pairs into memtables. The following can occur when the db has two or more column families.
Assume the db has column family "default" and "cf1". At a certain in time, both "default" and "cf1" have data in memtables.
1. Primary triggers a flush and flushes "cf1". "default" is **not** flushed.
2. Secondary replays the MANIFEST updates its db sequence number to the latest value learned from the MANIFEST.
3. Secondary starts to replay WAL that contains the writes to "default". It is possible that the write batches' sequence numbers are smaller than the db sequence number. In this case, these write batches will be skipped, and these updates will not be visible to reader until "default" is later flushed.
Pull Request resolved: https://github.com/facebook/rocksdb/pull/5413

Differential Revision: D15637407

Pulled By: riversand963

fbshipit-source-id: 3de3fe35cfc6f1b9f844f3f926f0df29717b6580
2019-06-10 12:58:14 -07:00
Maysam Yabandeh
c292dc8540 WritePrepared: reduce prepared_mutex_ overhead (#5420)
Summary:
The patch reduces the contention over prepared_mutex_ using these techniques:
1) Move ::RemovePrepared() to be called from the commit callback when we have two write queues.
2) Use two separate mutex for PreparedHeap, one prepared_mutex_ needed for ::RemovePrepared, and one ::push_pop_mutex() needed for ::AddPrepared(). Given that we call ::AddPrepared only from the first write queue and ::RemovePrepared mostly from the 2nd, this will result into each the two write queues not competing with each other over a single mutex. ::RemovePrepared might occasionally need to acquire ::push_pop_mutex() if ::erase() ends up with calling ::pop()
3) Acquire ::push_pop_mutex() on the first callback of the write queue and release it on the last.
Pull Request resolved: https://github.com/facebook/rocksdb/pull/5420

Differential Revision: D15741985

Pulled By: maysamyabandeh

fbshipit-source-id: 84ce8016007e88bb6e10da5760ba1f0d26347735
2019-06-10 11:53:31 -07:00
anand76
b703a56e5c Potential fix for stress test failure due to "SST file ahead of WAL" error (#5412)
Summary:
I'm not able to prove it, but the stress test failure may be caused by the following sequence of events -

1. Crash db_stress while writing the log file. This should result in a corrupted WAL.
2. Run db_stress with recycle_log_file_num=1. Crash during recovery immediately after writing manifest and updating the current file. The old log from the previous run is left behind, but the memtable would have been flushed during recovery and the CF log number will point to the newer log
3. Run db_stress with recycle_log_file_num=0. During recovery, the old log file will be processed and the corruption will be detected. Since the CF has moved ahead, we get the "SST file is ahead of WAL" error

Test -
1. stress_crash
2. make check
Pull Request resolved: https://github.com/facebook/rocksdb/pull/5412

Differential Revision: D15699120

Pulled By: anand1976

fbshipit-source-id: 9092ce81e7c4a0b4b4e66560c23ea4812a4d9cbe
2019-06-07 15:35:47 -07:00
Levi Tamasi
0f48e56f96 Revert to checking the upper bound on a per-key basis in BlockBasedTableIterator (#5428)
Summary:
PR #5111 reduced the number of key comparisons when iterating with
upper/lower bounds; however, this caused a regression for MyRocks.
Reverting to the previous behavior in BlockBasedTableIterator as a hotfix.
Pull Request resolved: https://github.com/facebook/rocksdb/pull/5428

Differential Revision: D15721038

Pulled By: ltamasi

fbshipit-source-id: 5450106442f1763bccd17f6cfd648697f2ae8b6c
2019-06-07 15:17:05 -07:00
Zhongyi Xie
d68f9f4580 simplify include directive involving inttypes (#5402)
Summary:
When using `PRIu64` type of printf specifier, current code base does the following:
```
#ifndef __STDC_FORMAT_MACROS
#define __STDC_FORMAT_MACROS
#endif
#include <inttypes.h>
```
However, this can be simplified to
```
#include <cinttypes>
```
as long as flag `-std=c++11` is used.
This should solve issues like https://github.com/facebook/rocksdb/issues/5159
Pull Request resolved: https://github.com/facebook/rocksdb/pull/5402

Differential Revision: D15701195

Pulled By: miasantreble

fbshipit-source-id: 6dac0a05f52aadb55e9728038599d3d2e4b59d03
2019-06-06 13:56:07 -07:00
Yanqin Jin
340ed4fac7 Add support for timestamp in Get/Put (#5079)
Summary:
It's useful to be able to (optionally) associate key-value pairs with user-provided timestamps. This PR is an early effort towards this goal and continues the work of facebook#4942. A suite of new unit tests exist in DBBasicTestWithTimestampWithParam. Support for timestamp requires the user to provide timestamp as a slice in `ReadOptions` and `WriteOptions`. All timestamps of the same database must share the same length, format, etc. The format of the timestamp is the same throughout the same database, and the user is responsible for providing a comparator function (Comparator) to order the <key, timestamp> tuples. Once created, the format and length of the timestamp cannot change (at least for now).

Test plan (on devserver):
```
$COMPILE_WITH_ASAN=1 make -j32 all
$./db_basic_test --gtest_filter=Timestamp/DBBasicTestWithTimestampWithParam.PutAndGet/*
$make check
```
All tests must pass.

We also run the following db_bench tests to verify whether there is regression on Get/Put while timestamp is not enabled.
```
$TEST_TMPDIR=/dev/shm ./db_bench -benchmarks=fillseq,readrandom -num=1000000
$TEST_TMPDIR=/dev/shm ./db_bench -benchmarks=fillrandom -num=1000000
```
Repeat for 6 times for both versions.

Results are as follows:
```
|        | readrandom | fillrandom |
| master | 16.77 MB/s | 47.05 MB/s |
| PR5079 | 16.44 MB/s | 47.03 MB/s |
```
Pull Request resolved: https://github.com/facebook/rocksdb/pull/5079

Differential Revision: D15132946

Pulled By: riversand963

fbshipit-source-id: 833a0d657eac21182f0f206c910a6438154c742c
2019-06-05 23:10:47 -07:00
haoyuhuang
227b5d52df Make RocksDB secondary instance respect atomic groups in version edits. (#5411)
Summary:
With this commit, RocksDB secondary instance respects atomic groups in version edits.
Pull Request resolved: https://github.com/facebook/rocksdb/pull/5411

Differential Revision: D15617512

Pulled By: HaoyuHuang

fbshipit-source-id: 913f4ede391d772dcaf5649e3cd2099fa292d120
2019-06-04 10:56:19 -07:00
Andrew Kryczka
ebe89ef9d8 Fix merging range tombstone covering put during flush/compaction (#5406)
Summary:
Flush/compaction use `MergeUntil` which has a special code path to
handle a merge ending with a non-`Merge` point key. In particular if
that key is a `Put` we forgot to check whether it is covered by a range
tombstone. If it is covered then we must not include it in the following call
to `TimedFullMerge`.

Fixes #5392.
Pull Request resolved: https://github.com/facebook/rocksdb/pull/5406

Differential Revision: D15611144

Pulled By: sagar0

fbshipit-source-id: ba6a7863ca2d043f591de78fd0c4f4561f0c500e
2019-06-04 10:24:14 -07:00
anand76
5d6e8df1cf Ignore shutdown error during compaction (#5400)
Summary:
The PR #5275 separated the column dropped and shutdown status codes. However, there were a couple of places in compaction where this change ended up treating a ShutdownInProgress() error as a real error and set bg_error. This caused MyRocks unit test to fail due to WAL writes during shutdown returning this error. Fix it by ignoring the shutdown status during compaction.
Pull Request resolved: https://github.com/facebook/rocksdb/pull/5400

Differential Revision: D15611680

Pulled By: anand1976

fbshipit-source-id: c602e97840e3ae24eb420d61e0ce95d3e6258632
2019-06-03 22:40:43 -07:00
Maysam Yabandeh
ae05a83e19 Call ValidateOptions from SetOptions (#5368)
Summary:
Currently we validate options in DB::Open. However the validation step is missing when options are dynamically updated in ::SetOptions. The patch fixes that.
Pull Request resolved: https://github.com/facebook/rocksdb/pull/5368

Differential Revision: D15540101

Pulled By: maysamyabandeh

fbshipit-source-id: d27bbffd8f0252d1b50bcf59e0a70a278ed937f4
2019-06-03 19:49:57 -07:00
Siying Dong
5851cb7fdb Move util/trace_replay.* to trace_replay/ (#5376)
Summary:
util/ means for lower level libraries. trace_replay is highly integrated to DB and sometimes call DB. Move it out to a separate directory.
Pull Request resolved: https://github.com/facebook/rocksdb/pull/5376

Differential Revision: D15550938

Pulled By: siying

fbshipit-source-id: f46dce5ceffdc05a73f26379c7bb1b79ebe6c207
2019-06-03 13:25:26 -07:00
Siying Dong
000b9ec217 Move some logging related files to logging/ (#5387)
Summary:
Many logging related source files are under util/. It will be more structured if they are together.
Pull Request resolved: https://github.com/facebook/rocksdb/pull/5387

Differential Revision: D15579036

Pulled By: siying

fbshipit-source-id: 3850134ed50b8c0bb40a0c8ae1f184fa4081303f
2019-05-31 17:23:59 -07:00
Vijay Nadimpalli
cae22c53fb Make format
Summary: Pull Request resolved: https://github.com/facebook/rocksdb/pull/5395

Differential Revision: D15581698

Pulled By: vjnadimpalli

fbshipit-source-id: f415972f16e784b1361714c202b97defcab46767
2019-05-31 15:24:43 -07:00
Vijay Nadimpalli
49c5a12dbe Organizing rocksdb/db directory
Summary: Pull Request resolved: https://github.com/facebook/rocksdb/pull/5390

Differential Revision: D15579388

Pulled By: vjnadimpalli

fbshipit-source-id: 5bfc95e31554b8ff05b97b76d6534113f527f366
2019-05-31 11:57:01 -07:00
Zhongyi Xie
ab8f6c01a6 move LevelCompactionPicker to a separate file (#5369)
Summary:
In order to improve code readability, this PR moves LevelCompactionBuilder and LevelCompactionPicker to compaction_picker_level.h and .cc
Pull Request resolved: https://github.com/facebook/rocksdb/pull/5369

Differential Revision: D15540172

Pulled By: miasantreble

fbshipit-source-id: c1a578b93f127cd63661b53f32b356e6edd349af
2019-05-30 21:38:24 -07:00
Sagar Vemuri
ff9d286877 Reorder DBImpl's private section (#5385)
Summary:
The methods and fields in the private section of DBImpl were all intermingled, making it hard to figure out where the fields/methods start and where they end. I cleaned up the code a little so that all the type declaration are at the beginning, followed by methods, and all the data fields are at the end. This follows
Pull Request resolved: https://github.com/facebook/rocksdb/pull/5385

Differential Revision: D15566978

Pulled By: sagar0

fbshipit-source-id: 4618a7d819ad4e2d7cc9ae1af2c59f400140bb1b
2019-05-30 21:32:46 -07:00
Yanqin Jin
b9f5900658 Fix WAL replay by skipping old write batches (#5170)
Summary:
1. Fix a bug in WAL replay in which write batches with old sequence numbers are mistakenly inserted into memtables.
2. Add support for benchmarking secondary instance to db_bench_tool.
With changes made in this PR, we can start benchmarking secondary instance
using two processes. It is also possible to vary the frequency at which the
secondary instance tries to catch up with the primary. The info log of the
secondary can be found in a directory whose path can be specified with
'-secondary_path'.
Pull Request resolved: https://github.com/facebook/rocksdb/pull/5170

Differential Revision: D15564608

Pulled By: riversand963

fbshipit-source-id: ce97688ed3d33f69d3a0b9266ebbbbf887aa0ec8
2019-05-30 19:33:33 -07:00
Siying Dong
8843129ece Move some memory related files from util/ to memory/ (#5382)
Summary:
Move arena, allocator, and memory tools under util to a separate memory/ directory.
Pull Request resolved: https://github.com/facebook/rocksdb/pull/5382

Differential Revision: D15564655

Pulled By: siying

fbshipit-source-id: 9cd6b5d0d3d52b39606e19221fa154596e5852a5
2019-05-30 17:44:09 -07:00
Yanqin Jin
f1302ebab8 Add class-level comments to version-related classes (#5348)
Summary:
As title.
Pull Request resolved: https://github.com/facebook/rocksdb/pull/5348

Differential Revision: D15564595

Pulled By: riversand963

fbshipit-source-id: dd45aa86a70e0343c2e9ef702fad165163f548e6
2019-05-30 16:18:33 -07:00
Sagar Vemuri
1b59a490ef Fix flaky DBTest2.PresetCompressionDict test (#5378)
Summary:
Fix flaky DBTest2.PresetCompressionDict test.

This PR fixes two issues with the test:
1. Replaces `GetSstFiles` with `TotalSize`, which is based on `DB::GetColumnFamilyMetaData` so that only the size of the live SST files is taken into consideration when computing the total size of all sst files. Earlier, with `GetSstFiles`, even obsolete files were getting picked up.
1. In ZSTD compression, it is sometimes possible that using a trained dictionary is not better than using an untrained one. Using a trained dictionary performs well in 99% of the cases, but still in the remaining ~1% of the cases (out of 10000 runs) using an untrained dictionary gets better compression results.
Pull Request resolved: https://github.com/facebook/rocksdb/pull/5378

Differential Revision: D15559100

Pulled By: sagar0

fbshipit-source-id: c35adbf13871f520a2cec48f8bad9ff27ff7a0b4
2019-05-30 16:11:27 -07:00
Vijay Nadimpalli
50e470791d Organizing rocksdb/table directory by format
Summary: Pull Request resolved: https://github.com/facebook/rocksdb/pull/5373

Differential Revision: D15559425

Pulled By: vjnadimpalli

fbshipit-source-id: 5d6d6d615582bedd96a4b879bb25d429a6de8b55
2019-05-30 14:51:11 -07:00
Sagar Vemuri
e62986260f Fix env_options_for_read spelling in CompactionJob
Summary: Pull Request resolved: https://github.com/facebook/rocksdb/pull/5380

Differential Revision: D15563386

Pulled By: sagar0

fbshipit-source-id: 8b26aef47cfc40ff8016daf815582f21cdd40df2
2019-05-30 14:04:53 -07:00
Levi Tamasi
1e35584251 Move the index readers out of the block cache (#5298)
Summary:
Currently, when the block cache is used for index blocks as well, it is
not really the index block that is stored in the cache but an
IndexReader object. Since this object is not pure data (it has, for
instance, pointers that might dangle), it's not really sharable. To
avoid the issues around this, the current code uses a dummy unique cache
key for each TableReader to store the IndexReader, and erases the
IndexReader entry when the TableReader is closed. Instead of doing this,
the new code moves the IndexReader out of the cache altogether. In
particular, instead of the TableReader owning, or caching/pinning the
IndexReader based on the customer's settings, the TableReader
unconditionally owns the IndexReader, which in turn owns/caches/pins
the index block (which is itself sharable and thus can be safely put in
the cache without any hacks).

Note: the change has two side effects:
1) Partitions of partitioned indexes no longer affect the read
amplification statistics.
2) Eviction statistics for index blocks are temporarily broken. We plan to fix
this in a separate phase.
Pull Request resolved: https://github.com/facebook/rocksdb/pull/5298

Differential Revision: D15303203

Pulled By: ltamasi

fbshipit-source-id: 935a69ba59d87d5e44f42e2310619b790c366e47
2019-05-30 11:53:27 -07:00
Siying Dong
e9e0101ca4 Move test related files under util/ to test_util/ (#5377)
Summary:
There are too many types of files under util/. Some test related files don't belong to there or just are just loosely related. Mo
ve them to a new directory test_util/, so that util/ is cleaner.
Pull Request resolved: https://github.com/facebook/rocksdb/pull/5377

Differential Revision: D15551366

Pulled By: siying

fbshipit-source-id: 0f5c8653832354ef8caa31749c0143815d719e2c
2019-05-30 11:25:51 -07:00
anand76
a984040f0b Increase Trash/DB size ratio in DBSSTTest.RateLimitedWALDelete (#5366)
Summary:
By increasing the ratio, we ensure that all files go through background deletion and eliminate flakiness due to timing of deletions.
Pull Request resolved: https://github.com/facebook/rocksdb/pull/5366

Differential Revision: D15549992

Pulled By: anand1976

fbshipit-source-id: d137375cd791fc1a802841412755d6e2b8fd7688
2019-05-30 11:12:59 -07:00
Zhongyi Xie
87fe4bcab8 Fix FIFO dynamic options sanitization (#5367)
Summary:
When dynamically setting options, we check the option type info and skip options that are marked deprecated. However this check is only done at top level, which results in bugs where SetOptions will corrupt option values and cause unexpected system behavior iff a deprecated second level option is set dynamically.
For exmaple, the following call:
```
dbfull()->SetOptions(
    {{"compaction_options_fifo",
        "{allow_compaction=true;max_table_files_size=1024;ttl=731;}"}});
```
was from pre 6.0 release when `ttl` was part of `compaction_options_fifo`. Now that it got moved out of `compaction_options_fifo`, this call will incorrectly set `compaction_options_fifo.max_table_files_size` to 731 (as `max_table_files_size` is the first one in `OptionsHelper::fifo_compaction_options_type_info` struct) and cause files to gett evicted much faster than expected.

This PR adds verification to second level options like `compaction_options_fifo.ttl` or `compaction_options_fifo.max_table_files_size` when set dynamically, and filter out those marked as deprecated.
Pull Request resolved: https://github.com/facebook/rocksdb/pull/5367

Differential Revision: D15530998

Pulled By: miasantreble

fbshipit-source-id: 818258be5c3abe09cd82d62f3c083572d70fecdd
2019-05-30 10:46:28 -07:00
Siying Dong
545d206040 Move some file related files outside util/ (#5375)
Summary:
util/ means for lower level libraries, so it's a good idea to move the files which requires knowledge to DB out. Create a file/ and move some files there.
Pull Request resolved: https://github.com/facebook/rocksdb/pull/5375

Differential Revision: D15550935

Pulled By: siying

fbshipit-source-id: 61a9715dcde5386eebfb43e93f847bba1ae0d3f2
2019-05-29 20:47:06 -07:00
Siying Dong
4d0c3b1f96 Add comments in compaction_picker.h
Summary: Pull Request resolved: https://github.com/facebook/rocksdb/pull/5357

Differential Revision: D15522825

Pulled By: siying

fbshipit-source-id: d775386b9d10c7179f5d3af2c821ed213abfacdf
2019-05-28 12:24:38 -07:00
Zhongyi Xie
a466120cd5 improve comments in db_impl_secondary
Summary: Pull Request resolved: https://github.com/facebook/rocksdb/pull/5360

Differential Revision: D15502973

Pulled By: miasantreble

fbshipit-source-id: 15b7f9d7928e771a6fac0643861173be8ba6b37a
2019-05-24 15:32:03 -07:00