rocksdb/db/external_sst_file_ingestion_job.cc
Jeffrey Xiao d61d4507c0 Fix IngestExternalFile overlapping check (#5649)
Summary:
Previously, the end key of a range deletion tombstone was considered exclusive for the purposes of deletion, but considered inclusive when checking if two SSTables overlap. For example, an SSTable with a range deletion tombstone [a, b) would be considered overlapping with an SSTable with a range deletion tombstone [b, c). This commit fixes this check.
Pull Request resolved: https://github.com/facebook/rocksdb/pull/5649

Differential Revision: D16808765

Pulled By: anand1976

fbshipit-source-id: 5c7ad1c027e4f778d35070e5dae1b8e6037e0d68
2019-08-14 21:02:28 -07:00

668 lines
25 KiB
C++

// Copyright (c) 2011-present, Facebook, Inc. All rights reserved.
// This source code is licensed under both the GPLv2 (found in the
// COPYING file in the root directory) and Apache 2.0 License
// (found in the LICENSE.Apache file in the root directory).
#ifndef ROCKSDB_LITE
#include "db/external_sst_file_ingestion_job.h"
#include <algorithm>
#include <cinttypes>
#include <string>
#include <unordered_set>
#include <vector>
#include "db/db_impl/db_impl.h"
#include "db/version_edit.h"
#include "file/file_util.h"
#include "table/merging_iterator.h"
#include "table/scoped_arena_iterator.h"
#include "table/sst_file_writer_collectors.h"
#include "table/table_builder.h"
#include "test_util/sync_point.h"
#include "util/file_reader_writer.h"
#include "util/stop_watch.h"
namespace rocksdb {
Status ExternalSstFileIngestionJob::Prepare(
const std::vector<std::string>& external_files_paths,
uint64_t next_file_number, SuperVersion* sv) {
Status status;
// Read the information of files we are ingesting
for (const std::string& file_path : external_files_paths) {
IngestedFileInfo file_to_ingest;
status = GetIngestedFileInfo(file_path, &file_to_ingest, sv);
if (!status.ok()) {
return status;
}
files_to_ingest_.push_back(file_to_ingest);
}
for (const IngestedFileInfo& f : files_to_ingest_) {
if (f.cf_id !=
TablePropertiesCollectorFactory::Context::kUnknownColumnFamily &&
f.cf_id != cfd_->GetID()) {
return Status::InvalidArgument(
"External file column family id dont match");
}
}
const Comparator* ucmp = cfd_->internal_comparator().user_comparator();
auto num_files = files_to_ingest_.size();
if (num_files == 0) {
return Status::InvalidArgument("The list of files is empty");
} else if (num_files > 1) {
// Verify that passed files dont have overlapping ranges
autovector<const IngestedFileInfo*> sorted_files;
for (size_t i = 0; i < num_files; i++) {
sorted_files.push_back(&files_to_ingest_[i]);
}
std::sort(
sorted_files.begin(), sorted_files.end(),
[&ucmp](const IngestedFileInfo* info1, const IngestedFileInfo* info2) {
return sstableKeyCompare(ucmp, info1->smallest_internal_key,
info2->smallest_internal_key) < 0;
});
for (size_t i = 0; i < num_files - 1; i++) {
if (sstableKeyCompare(ucmp, sorted_files[i]->largest_internal_key,
sorted_files[i + 1]->smallest_internal_key) >= 0) {
return Status::NotSupported("Files have overlapping ranges");
}
}
}
for (IngestedFileInfo& f : files_to_ingest_) {
if (f.num_entries == 0 && f.num_range_deletions == 0) {
return Status::InvalidArgument("File contain no entries");
}
if (!f.smallest_internal_key.Valid() ||
!f.largest_internal_key.Valid()) {
return Status::Corruption("Generated table have corrupted keys");
}
}
// Copy/Move external files into DB
std::unordered_set<size_t> ingestion_path_ids;
for (IngestedFileInfo& f : files_to_ingest_) {
f.fd = FileDescriptor(next_file_number++, 0, f.file_size);
f.copy_file = false;
const std::string path_outside_db = f.external_file_path;
const std::string path_inside_db =
TableFileName(cfd_->ioptions()->cf_paths, f.fd.GetNumber(),
f.fd.GetPathId());
if (ingestion_options_.move_files) {
status = env_->LinkFile(path_outside_db, path_inside_db);
if (status.ok()) {
// It is unsafe to assume application had sync the file and file
// directory before ingest the file. For integrity of RocksDB we need
// to sync the file.
std::unique_ptr<WritableFile> file_to_sync;
status = env_->ReopenWritableFile(path_inside_db, &file_to_sync,
env_options_);
if (status.ok()) {
TEST_SYNC_POINT(
"ExternalSstFileIngestionJob::BeforeSyncIngestedFile");
status = SyncIngestedFile(file_to_sync.get());
TEST_SYNC_POINT("ExternalSstFileIngestionJob::AfterSyncIngestedFile");
if (!status.ok()) {
ROCKS_LOG_WARN(db_options_.info_log,
"Failed to sync ingested file %s: %s",
path_inside_db.c_str(), status.ToString().c_str());
}
}
} else if (status.IsNotSupported() &&
ingestion_options_.failed_move_fall_back_to_copy) {
// Original file is on a different FS, use copy instead of hard linking.
f.copy_file = true;
}
} else {
f.copy_file = true;
}
if (f.copy_file) {
TEST_SYNC_POINT_CALLBACK("ExternalSstFileIngestionJob::Prepare:CopyFile",
nullptr);
// CopyFile also sync the new file.
status = CopyFile(env_, path_outside_db, path_inside_db, 0,
db_options_.use_fsync);
}
TEST_SYNC_POINT("ExternalSstFileIngestionJob::Prepare:FileAdded");
if (!status.ok()) {
break;
}
f.internal_file_path = path_inside_db;
ingestion_path_ids.insert(f.fd.GetPathId());
}
TEST_SYNC_POINT("ExternalSstFileIngestionJob::BeforeSyncDir");
if (status.ok()) {
for (auto path_id : ingestion_path_ids) {
status = directories_->GetDataDir(path_id)->Fsync();
if (!status.ok()) {
ROCKS_LOG_WARN(db_options_.info_log,
"Failed to sync directory %" ROCKSDB_PRIszt
" while ingest file: %s",
path_id, status.ToString().c_str());
break;
}
}
}
TEST_SYNC_POINT("ExternalSstFileIngestionJob::AfterSyncDir");
// TODO: The following is duplicated with Cleanup().
if (!status.ok()) {
// We failed, remove all files that we copied into the db
for (IngestedFileInfo& f : files_to_ingest_) {
if (f.internal_file_path.empty()) {
break;
}
Status s = env_->DeleteFile(f.internal_file_path);
if (!s.ok()) {
ROCKS_LOG_WARN(db_options_.info_log,
"AddFile() clean up for file %s failed : %s",
f.internal_file_path.c_str(), s.ToString().c_str());
}
}
}
return status;
}
Status ExternalSstFileIngestionJob::NeedsFlush(bool* flush_needed,
SuperVersion* super_version) {
autovector<Range> ranges;
for (const IngestedFileInfo& file_to_ingest : files_to_ingest_) {
ranges.emplace_back(file_to_ingest.smallest_internal_key.user_key(),
file_to_ingest.largest_internal_key.user_key());
}
Status status =
cfd_->RangesOverlapWithMemtables(ranges, super_version, flush_needed);
if (status.ok() && *flush_needed &&
!ingestion_options_.allow_blocking_flush) {
status = Status::InvalidArgument("External file requires flush");
}
return status;
}
// REQUIRES: we have become the only writer by entering both write_thread_ and
// nonmem_write_thread_
Status ExternalSstFileIngestionJob::Run() {
Status status;
SuperVersion* super_version = cfd_->GetSuperVersion();
#ifndef NDEBUG
// We should never run the job with a memtable that is overlapping
// with the files we are ingesting
bool need_flush = false;
status = NeedsFlush(&need_flush, super_version);
assert(status.ok() && need_flush == false);
#endif
bool force_global_seqno = false;
if (ingestion_options_.snapshot_consistency && !db_snapshots_->empty()) {
// We need to assign a global sequence number to all the files even
// if the dont overlap with any ranges since we have snapshots
force_global_seqno = true;
}
// It is safe to use this instead of LastAllocatedSequence since we are
// the only active writer, and hence they are equal
const SequenceNumber last_seqno = versions_->LastSequence();
edit_.SetColumnFamily(cfd_->GetID());
// The levels that the files will be ingested into
for (IngestedFileInfo& f : files_to_ingest_) {
SequenceNumber assigned_seqno = 0;
if (ingestion_options_.ingest_behind) {
status = CheckLevelForIngestedBehindFile(&f);
} else {
status = AssignLevelAndSeqnoForIngestedFile(
super_version, force_global_seqno, cfd_->ioptions()->compaction_style,
&f, &assigned_seqno);
}
if (!status.ok()) {
return status;
}
status = AssignGlobalSeqnoForIngestedFile(&f, assigned_seqno);
TEST_SYNC_POINT_CALLBACK("ExternalSstFileIngestionJob::Run",
&assigned_seqno);
if (assigned_seqno == last_seqno + 1) {
consumed_seqno_ = true;
}
if (!status.ok()) {
return status;
}
edit_.AddFile(f.picked_level, f.fd.GetNumber(), f.fd.GetPathId(),
f.fd.GetFileSize(), f.smallest_internal_key,
f.largest_internal_key, f.assigned_seqno, f.assigned_seqno,
false);
}
return status;
}
void ExternalSstFileIngestionJob::UpdateStats() {
// Update internal stats for new ingested files
uint64_t total_keys = 0;
uint64_t total_l0_files = 0;
uint64_t total_time = env_->NowMicros() - job_start_time_;
for (IngestedFileInfo& f : files_to_ingest_) {
InternalStats::CompactionStats stats(CompactionReason::kExternalSstIngestion, 1);
stats.micros = total_time;
// If actual copy occurred for this file, then we need to count the file
// size as the actual bytes written. If the file was linked, then we ignore
// the bytes written for file metadata.
// TODO (yanqin) maybe account for file metadata bytes for exact accuracy?
if (f.copy_file) {
stats.bytes_written = f.fd.GetFileSize();
} else {
stats.bytes_moved = f.fd.GetFileSize();
}
stats.num_output_files = 1;
cfd_->internal_stats()->AddCompactionStats(f.picked_level,
Env::Priority::USER, stats);
cfd_->internal_stats()->AddCFStats(InternalStats::BYTES_INGESTED_ADD_FILE,
f.fd.GetFileSize());
total_keys += f.num_entries;
if (f.picked_level == 0) {
total_l0_files += 1;
}
ROCKS_LOG_INFO(
db_options_.info_log,
"[AddFile] External SST file %s was ingested in L%d with path %s "
"(global_seqno=%" PRIu64 ")\n",
f.external_file_path.c_str(), f.picked_level,
f.internal_file_path.c_str(), f.assigned_seqno);
}
cfd_->internal_stats()->AddCFStats(InternalStats::INGESTED_NUM_KEYS_TOTAL,
total_keys);
cfd_->internal_stats()->AddCFStats(InternalStats::INGESTED_NUM_FILES_TOTAL,
files_to_ingest_.size());
cfd_->internal_stats()->AddCFStats(
InternalStats::INGESTED_LEVEL0_NUM_FILES_TOTAL, total_l0_files);
}
void ExternalSstFileIngestionJob::Cleanup(const Status& status) {
if (!status.ok()) {
// We failed to add the files to the database
// remove all the files we copied
for (IngestedFileInfo& f : files_to_ingest_) {
Status s = env_->DeleteFile(f.internal_file_path);
if (!s.ok()) {
ROCKS_LOG_WARN(db_options_.info_log,
"AddFile() clean up for file %s failed : %s",
f.internal_file_path.c_str(), s.ToString().c_str());
}
}
consumed_seqno_ = false;
} else if (status.ok() && ingestion_options_.move_files) {
// The files were moved and added successfully, remove original file links
for (IngestedFileInfo& f : files_to_ingest_) {
Status s = env_->DeleteFile(f.external_file_path);
if (!s.ok()) {
ROCKS_LOG_WARN(
db_options_.info_log,
"%s was added to DB successfully but failed to remove original "
"file link : %s",
f.external_file_path.c_str(), s.ToString().c_str());
}
}
}
}
Status ExternalSstFileIngestionJob::GetIngestedFileInfo(
const std::string& external_file, IngestedFileInfo* file_to_ingest,
SuperVersion* sv) {
file_to_ingest->external_file_path = external_file;
// Get external file size
Status status = env_->GetFileSize(external_file, &file_to_ingest->file_size);
if (!status.ok()) {
return status;
}
// Create TableReader for external file
std::unique_ptr<TableReader> table_reader;
std::unique_ptr<RandomAccessFile> sst_file;
std::unique_ptr<RandomAccessFileReader> sst_file_reader;
status = env_->NewRandomAccessFile(external_file, &sst_file, env_options_);
if (!status.ok()) {
return status;
}
sst_file_reader.reset(new RandomAccessFileReader(std::move(sst_file),
external_file));
status = cfd_->ioptions()->table_factory->NewTableReader(
TableReaderOptions(*cfd_->ioptions(),
sv->mutable_cf_options.prefix_extractor.get(),
env_options_, cfd_->internal_comparator()),
std::move(sst_file_reader), file_to_ingest->file_size, &table_reader);
if (!status.ok()) {
return status;
}
if (ingestion_options_.verify_checksums_before_ingest) {
status =
table_reader->VerifyChecksum(TableReaderCaller::kExternalSSTIngestion);
}
if (!status.ok()) {
return status;
}
// Get the external file properties
auto props = table_reader->GetTableProperties();
const auto& uprops = props->user_collected_properties;
// Get table version
auto version_iter = uprops.find(ExternalSstFilePropertyNames::kVersion);
if (version_iter == uprops.end()) {
return Status::Corruption("External file version not found");
}
file_to_ingest->version = DecodeFixed32(version_iter->second.c_str());
auto seqno_iter = uprops.find(ExternalSstFilePropertyNames::kGlobalSeqno);
if (file_to_ingest->version == 2) {
// version 2 imply that we have global sequence number
if (seqno_iter == uprops.end()) {
return Status::Corruption(
"External file global sequence number not found");
}
// Set the global sequence number
file_to_ingest->original_seqno = DecodeFixed64(seqno_iter->second.c_str());
auto offsets_iter = props->properties_offsets.find(
ExternalSstFilePropertyNames::kGlobalSeqno);
if (offsets_iter == props->properties_offsets.end() ||
offsets_iter->second == 0) {
file_to_ingest->global_seqno_offset = 0;
return Status::Corruption("Was not able to find file global seqno field");
}
file_to_ingest->global_seqno_offset = static_cast<size_t>(offsets_iter->second);
} else if (file_to_ingest->version == 1) {
// SST file V1 should not have global seqno field
assert(seqno_iter == uprops.end());
file_to_ingest->original_seqno = 0;
if (ingestion_options_.allow_blocking_flush ||
ingestion_options_.allow_global_seqno) {
return Status::InvalidArgument(
"External SST file V1 does not support global seqno");
}
} else {
return Status::InvalidArgument("External file version is not supported");
}
// Get number of entries in table
file_to_ingest->num_entries = props->num_entries;
file_to_ingest->num_range_deletions = props->num_range_deletions;
ParsedInternalKey key;
ReadOptions ro;
// During reading the external file we can cache blocks that we read into
// the block cache, if we later change the global seqno of this file, we will
// have block in cache that will include keys with wrong seqno.
// We need to disable fill_cache so that we read from the file without
// updating the block cache.
ro.fill_cache = false;
std::unique_ptr<InternalIterator> iter(table_reader->NewIterator(
ro, sv->mutable_cf_options.prefix_extractor.get(), /*arena=*/nullptr,
/*skip_filters=*/false, TableReaderCaller::kExternalSSTIngestion));
std::unique_ptr<InternalIterator> range_del_iter(
table_reader->NewRangeTombstoneIterator(ro));
// Get first (smallest) and last (largest) key from file.
file_to_ingest->smallest_internal_key = InternalKey("", 0, ValueType::kTypeValue);
file_to_ingest->largest_internal_key = InternalKey("", 0, ValueType::kTypeValue);
bool bounds_set = false;
iter->SeekToFirst();
if (iter->Valid()) {
if (!ParseInternalKey(iter->key(), &key)) {
return Status::Corruption("external file have corrupted keys");
}
if (key.sequence != 0) {
return Status::Corruption("external file have non zero sequence number");
}
file_to_ingest->smallest_internal_key.SetFrom(key);
iter->SeekToLast();
if (!ParseInternalKey(iter->key(), &key)) {
return Status::Corruption("external file have corrupted keys");
}
if (key.sequence != 0) {
return Status::Corruption("external file have non zero sequence number");
}
file_to_ingest->largest_internal_key.SetFrom(key);
bounds_set = true;
}
// We may need to adjust these key bounds, depending on whether any range
// deletion tombstones extend past them.
const Comparator* ucmp = cfd_->internal_comparator().user_comparator();
if (range_del_iter != nullptr) {
for (range_del_iter->SeekToFirst(); range_del_iter->Valid();
range_del_iter->Next()) {
if (!ParseInternalKey(range_del_iter->key(), &key)) {
return Status::Corruption("external file have corrupted keys");
}
RangeTombstone tombstone(key, range_del_iter->value());
InternalKey start_key = tombstone.SerializeKey();
if (!bounds_set || sstableKeyCompare(ucmp, start_key, file_to_ingest->smallest_internal_key) < 0) {
file_to_ingest->smallest_internal_key = start_key;
}
InternalKey end_key = tombstone.SerializeEndKey();
if (!bounds_set || sstableKeyCompare(ucmp, end_key, file_to_ingest->largest_internal_key) > 0) {
file_to_ingest->largest_internal_key = end_key;
}
bounds_set = true;
}
}
file_to_ingest->cf_id = static_cast<uint32_t>(props->column_family_id);
file_to_ingest->table_properties = *props;
return status;
}
Status ExternalSstFileIngestionJob::AssignLevelAndSeqnoForIngestedFile(
SuperVersion* sv, bool force_global_seqno, CompactionStyle compaction_style,
IngestedFileInfo* file_to_ingest, SequenceNumber* assigned_seqno) {
Status status;
*assigned_seqno = 0;
const SequenceNumber last_seqno = versions_->LastSequence();
if (force_global_seqno) {
*assigned_seqno = last_seqno + 1;
if (compaction_style == kCompactionStyleUniversal) {
file_to_ingest->picked_level = 0;
return status;
}
}
bool overlap_with_db = false;
Arena arena;
ReadOptions ro;
ro.total_order_seek = true;
int target_level = 0;
auto* vstorage = cfd_->current()->storage_info();
for (int lvl = 0; lvl < cfd_->NumberLevels(); lvl++) {
if (lvl > 0 && lvl < vstorage->base_level()) {
continue;
}
if (vstorage->NumLevelFiles(lvl) > 0) {
bool overlap_with_level = false;
status = sv->current->OverlapWithLevelIterator(ro, env_options_,
file_to_ingest->smallest_internal_key.user_key(), file_to_ingest->largest_internal_key.user_key(),
lvl, &overlap_with_level);
if (!status.ok()) {
return status;
}
if (overlap_with_level) {
// We must use L0 or any level higher than `lvl` to be able to overwrite
// the keys that we overlap with in this level, We also need to assign
// this file a seqno to overwrite the existing keys in level `lvl`
overlap_with_db = true;
break;
}
if (compaction_style == kCompactionStyleUniversal && lvl != 0) {
const std::vector<FileMetaData*>& level_files =
vstorage->LevelFiles(lvl);
const SequenceNumber level_largest_seqno =
(*max_element(level_files.begin(), level_files.end(),
[](FileMetaData* f1, FileMetaData* f2) {
return f1->fd.largest_seqno < f2->fd.largest_seqno;
}))
->fd.largest_seqno;
// should only assign seqno to current level's largest seqno when
// the file fits
if (level_largest_seqno != 0 &&
IngestedFileFitInLevel(file_to_ingest, lvl)) {
*assigned_seqno = level_largest_seqno;
} else {
continue;
}
}
} else if (compaction_style == kCompactionStyleUniversal) {
continue;
}
// We dont overlap with any keys in this level, but we still need to check
// if our file can fit in it
if (IngestedFileFitInLevel(file_to_ingest, lvl)) {
target_level = lvl;
}
}
TEST_SYNC_POINT_CALLBACK(
"ExternalSstFileIngestionJob::AssignLevelAndSeqnoForIngestedFile",
&overlap_with_db);
file_to_ingest->picked_level = target_level;
if (overlap_with_db && *assigned_seqno == 0) {
*assigned_seqno = last_seqno + 1;
}
return status;
}
Status ExternalSstFileIngestionJob::CheckLevelForIngestedBehindFile(
IngestedFileInfo* file_to_ingest) {
auto* vstorage = cfd_->current()->storage_info();
// first check if new files fit in the bottommost level
int bottom_lvl = cfd_->NumberLevels() - 1;
if(!IngestedFileFitInLevel(file_to_ingest, bottom_lvl)) {
return Status::InvalidArgument(
"Can't ingest_behind file as it doesn't fit "
"at the bottommost level!");
}
// second check if despite allow_ingest_behind=true we still have 0 seqnums
// at some upper level
for (int lvl = 0; lvl < cfd_->NumberLevels() - 1; lvl++) {
for (auto file : vstorage->LevelFiles(lvl)) {
if (file->fd.smallest_seqno == 0) {
return Status::InvalidArgument(
"Can't ingest_behind file as despite allow_ingest_behind=true "
"there are files with 0 seqno in database at upper levels!");
}
}
}
file_to_ingest->picked_level = bottom_lvl;
return Status::OK();
}
Status ExternalSstFileIngestionJob::AssignGlobalSeqnoForIngestedFile(
IngestedFileInfo* file_to_ingest, SequenceNumber seqno) {
if (file_to_ingest->original_seqno == seqno) {
// This file already have the correct global seqno
return Status::OK();
} else if (!ingestion_options_.allow_global_seqno) {
return Status::InvalidArgument("Global seqno is required, but disabled");
} else if (file_to_ingest->global_seqno_offset == 0) {
return Status::InvalidArgument(
"Trying to set global seqno for a file that dont have a global seqno "
"field");
}
if (ingestion_options_.write_global_seqno) {
// Determine if we can write global_seqno to a given offset of file.
// If the file system does not support random write, then we should not.
// Otherwise we should.
std::unique_ptr<RandomRWFile> rwfile;
Status status = env_->NewRandomRWFile(file_to_ingest->internal_file_path,
&rwfile, env_options_);
if (status.ok()) {
std::string seqno_val;
PutFixed64(&seqno_val, seqno);
status = rwfile->Write(file_to_ingest->global_seqno_offset, seqno_val);
if (status.ok()) {
TEST_SYNC_POINT("ExternalSstFileIngestionJob::BeforeSyncGlobalSeqno");
status = SyncIngestedFile(rwfile.get());
TEST_SYNC_POINT("ExternalSstFileIngestionJob::AfterSyncGlobalSeqno");
if (!status.ok()) {
ROCKS_LOG_WARN(db_options_.info_log,
"Failed to sync ingested file %s after writing global "
"sequence number: %s",
file_to_ingest->internal_file_path.c_str(),
status.ToString().c_str());
}
}
if (!status.ok()) {
return status;
}
} else if (!status.IsNotSupported()) {
return status;
}
}
file_to_ingest->assigned_seqno = seqno;
return Status::OK();
}
bool ExternalSstFileIngestionJob::IngestedFileFitInLevel(
const IngestedFileInfo* file_to_ingest, int level) {
if (level == 0) {
// Files can always fit in L0
return true;
}
auto* vstorage = cfd_->current()->storage_info();
Slice file_smallest_user_key(file_to_ingest->smallest_internal_key.user_key());
Slice file_largest_user_key(file_to_ingest->largest_internal_key.user_key());
if (vstorage->OverlapInLevel(level, &file_smallest_user_key,
&file_largest_user_key)) {
// File overlap with another files in this level, we cannot
// add it to this level
return false;
}
if (cfd_->RangeOverlapWithCompaction(file_smallest_user_key,
file_largest_user_key, level)) {
// File overlap with a running compaction output that will be stored
// in this level, we cannot add this file to this level
return false;
}
// File did not overlap with level files, our compaction output
return true;
}
template <typename TWritableFile>
Status ExternalSstFileIngestionJob::SyncIngestedFile(TWritableFile* file) {
assert(file != nullptr);
if (db_options_.use_fsync) {
return file->Fsync();
} else {
return file->Sync();
}
}
} // namespace rocksdb
#endif // !ROCKSDB_LITE