rocksdb/db/flush_job.cc
Baptiste Lemaire e817bc9628 Added memtable garbage statistics (#8411)
Summary:
**Summary**:
2 new statistics counters are added to RocksDB: `MEMTABLE_PAYLOAD_BYTES_AT_FLUSH` and `MEMTABLE_GARBAGE_BYTES_AT_FLUSH`. The former tracks how many raw bytes of useful data are present on the memtable at flush time, whereas the latter is tracks how many of these raw bytes are considered garbage, meaning that they ended up not being imported on the SSTables resulting from the flush operations.

**Unit test**: run `make db_flush_test -j$(nproc); ./db_flush_test` to run the unit test.
This executable includes 3 tests, that test support and correct stat calculations for workloads with inserts, deletes, and DeleteRanges. The parameters are set such that the workloads are performed on a single memtable, and a single SSTable is created as a result of the flush operation. The flush operation is manually called in the test file. The tests verify that the values of these 2 statistics counters introduced in this PR  can be exactly predicted, showing that we have a full understanding of the underlying operations.

**Performance testing**:
`./db_bench -statistics -benchmarks=fillrandom -num=10000000` repeated 10 times.
Timing done using "date" function in a bash script.
_Results_:
Original Rocksdb fork: mean 66.6 sec, std 1.18 sec.
This feature branch: mean 67.4 sec, std 1.35 sec.

Pull Request resolved: https://github.com/facebook/rocksdb/pull/8411

Reviewed By: akankshamahajan15

Differential Revision: D29150629

Pulled By: bjlemaire

fbshipit-source-id: 7b3c2e86d50c6aa34fa50fd134282eacb543a5b1
2021-06-18 04:57:27 -07:00

540 lines
20 KiB
C++

// Copyright (c) 2011-present, Facebook, Inc. All rights reserved.
// This source code is licensed under both the GPLv2 (found in the
// COPYING file in the root directory) and Apache 2.0 License
// (found in the LICENSE.Apache file in the root directory).
//
// Copyright (c) 2011 The LevelDB Authors. All rights reserved.
// Use of this source code is governed by a BSD-style license that can be
// found in the LICENSE file. See the AUTHORS file for names of contributors.
#include "db/flush_job.h"
#include <cinttypes>
#include <algorithm>
#include <vector>
#include "db/builder.h"
#include "db/db_iter.h"
#include "db/dbformat.h"
#include "db/event_helpers.h"
#include "db/log_reader.h"
#include "db/log_writer.h"
#include "db/memtable.h"
#include "db/memtable_list.h"
#include "db/merge_context.h"
#include "db/range_tombstone_fragmenter.h"
#include "db/version_set.h"
#include "file/file_util.h"
#include "file/filename.h"
#include "logging/event_logger.h"
#include "logging/log_buffer.h"
#include "logging/logging.h"
#include "monitoring/iostats_context_imp.h"
#include "monitoring/perf_context_imp.h"
#include "monitoring/thread_status_util.h"
#include "port/port.h"
#include "rocksdb/db.h"
#include "rocksdb/env.h"
#include "rocksdb/statistics.h"
#include "rocksdb/status.h"
#include "rocksdb/table.h"
#include "table/merging_iterator.h"
#include "table/table_builder.h"
#include "table/two_level_iterator.h"
#include "test_util/sync_point.h"
#include "util/coding.h"
#include "util/mutexlock.h"
#include "util/stop_watch.h"
namespace ROCKSDB_NAMESPACE {
const char* GetFlushReasonString (FlushReason flush_reason) {
switch (flush_reason) {
case FlushReason::kOthers:
return "Other Reasons";
case FlushReason::kGetLiveFiles:
return "Get Live Files";
case FlushReason::kShutDown:
return "Shut down";
case FlushReason::kExternalFileIngestion:
return "External File Ingestion";
case FlushReason::kManualCompaction:
return "Manual Compaction";
case FlushReason::kWriteBufferManager:
return "Write Buffer Manager";
case FlushReason::kWriteBufferFull:
return "Write Buffer Full";
case FlushReason::kTest:
return "Test";
case FlushReason::kDeleteFiles:
return "Delete Files";
case FlushReason::kAutoCompaction:
return "Auto Compaction";
case FlushReason::kManualFlush:
return "Manual Flush";
case FlushReason::kErrorRecovery:
return "Error Recovery";
case FlushReason::kWalFull:
return "WAL Full";
default:
return "Invalid";
}
}
FlushJob::FlushJob(
const std::string& dbname, ColumnFamilyData* cfd,
const ImmutableDBOptions& db_options,
const MutableCFOptions& mutable_cf_options, uint64_t max_memtable_id,
const FileOptions& file_options, VersionSet* versions,
InstrumentedMutex* db_mutex, std::atomic<bool>* shutting_down,
std::vector<SequenceNumber> existing_snapshots,
SequenceNumber earliest_write_conflict_snapshot,
SnapshotChecker* snapshot_checker, JobContext* job_context,
LogBuffer* log_buffer, FSDirectory* db_directory,
FSDirectory* output_file_directory, CompressionType output_compression,
Statistics* stats, EventLogger* event_logger, bool measure_io_stats,
const bool sync_output_directory, const bool write_manifest,
Env::Priority thread_pri, const std::shared_ptr<IOTracer>& io_tracer,
const std::string& db_id, const std::string& db_session_id,
std::string full_history_ts_low, BlobFileCompletionCallback* blob_callback)
: dbname_(dbname),
db_id_(db_id),
db_session_id_(db_session_id),
cfd_(cfd),
db_options_(db_options),
mutable_cf_options_(mutable_cf_options),
max_memtable_id_(max_memtable_id),
file_options_(file_options),
versions_(versions),
db_mutex_(db_mutex),
shutting_down_(shutting_down),
existing_snapshots_(std::move(existing_snapshots)),
earliest_write_conflict_snapshot_(earliest_write_conflict_snapshot),
snapshot_checker_(snapshot_checker),
job_context_(job_context),
log_buffer_(log_buffer),
db_directory_(db_directory),
output_file_directory_(output_file_directory),
output_compression_(output_compression),
stats_(stats),
event_logger_(event_logger),
measure_io_stats_(measure_io_stats),
sync_output_directory_(sync_output_directory),
write_manifest_(write_manifest),
edit_(nullptr),
base_(nullptr),
pick_memtable_called(false),
thread_pri_(thread_pri),
io_tracer_(io_tracer),
clock_(db_options_.clock),
full_history_ts_low_(std::move(full_history_ts_low)),
blob_callback_(blob_callback) {
// Update the thread status to indicate flush.
ReportStartedFlush();
TEST_SYNC_POINT("FlushJob::FlushJob()");
}
FlushJob::~FlushJob() {
io_status_.PermitUncheckedError();
ThreadStatusUtil::ResetThreadStatus();
}
void FlushJob::ReportStartedFlush() {
ThreadStatusUtil::SetColumnFamily(cfd_, cfd_->ioptions()->env,
db_options_.enable_thread_tracking);
ThreadStatusUtil::SetThreadOperation(ThreadStatus::OP_FLUSH);
ThreadStatusUtil::SetThreadOperationProperty(
ThreadStatus::COMPACTION_JOB_ID,
job_context_->job_id);
IOSTATS_RESET(bytes_written);
}
void FlushJob::ReportFlushInputSize(const autovector<MemTable*>& mems) {
uint64_t input_size = 0;
for (auto* mem : mems) {
input_size += mem->ApproximateMemoryUsage();
}
ThreadStatusUtil::IncreaseThreadOperationProperty(
ThreadStatus::FLUSH_BYTES_MEMTABLES,
input_size);
}
void FlushJob::RecordFlushIOStats() {
RecordTick(stats_, FLUSH_WRITE_BYTES, IOSTATS(bytes_written));
ThreadStatusUtil::IncreaseThreadOperationProperty(
ThreadStatus::FLUSH_BYTES_WRITTEN, IOSTATS(bytes_written));
IOSTATS_RESET(bytes_written);
}
void FlushJob::PickMemTable() {
db_mutex_->AssertHeld();
assert(!pick_memtable_called);
pick_memtable_called = true;
// Save the contents of the earliest memtable as a new Table
cfd_->imm()->PickMemtablesToFlush(max_memtable_id_, &mems_);
if (mems_.empty()) {
return;
}
ReportFlushInputSize(mems_);
// entries mems are (implicitly) sorted in ascending order by their created
// time. We will use the first memtable's `edit` to keep the meta info for
// this flush.
MemTable* m = mems_[0];
edit_ = m->GetEdits();
edit_->SetPrevLogNumber(0);
// SetLogNumber(log_num) indicates logs with number smaller than log_num
// will no longer be picked up for recovery.
edit_->SetLogNumber(mems_.back()->GetNextLogNumber());
edit_->SetColumnFamily(cfd_->GetID());
// path 0 for level 0 file.
meta_.fd = FileDescriptor(versions_->NewFileNumber(), 0, 0);
base_ = cfd_->current();
base_->Ref(); // it is likely that we do not need this reference
}
Status FlushJob::Run(LogsWithPrepTracker* prep_tracker,
FileMetaData* file_meta) {
TEST_SYNC_POINT("FlushJob::Start");
db_mutex_->AssertHeld();
assert(pick_memtable_called);
AutoThreadOperationStageUpdater stage_run(
ThreadStatus::STAGE_FLUSH_RUN);
if (mems_.empty()) {
ROCKS_LOG_BUFFER(log_buffer_, "[%s] Nothing in memtable to flush",
cfd_->GetName().c_str());
return Status::OK();
}
// I/O measurement variables
PerfLevel prev_perf_level = PerfLevel::kEnableTime;
uint64_t prev_write_nanos = 0;
uint64_t prev_fsync_nanos = 0;
uint64_t prev_range_sync_nanos = 0;
uint64_t prev_prepare_write_nanos = 0;
uint64_t prev_cpu_write_nanos = 0;
uint64_t prev_cpu_read_nanos = 0;
if (measure_io_stats_) {
prev_perf_level = GetPerfLevel();
SetPerfLevel(PerfLevel::kEnableTime);
prev_write_nanos = IOSTATS(write_nanos);
prev_fsync_nanos = IOSTATS(fsync_nanos);
prev_range_sync_nanos = IOSTATS(range_sync_nanos);
prev_prepare_write_nanos = IOSTATS(prepare_write_nanos);
prev_cpu_write_nanos = IOSTATS(cpu_write_nanos);
prev_cpu_read_nanos = IOSTATS(cpu_read_nanos);
}
// This will release and re-acquire the mutex.
Status s = WriteLevel0Table();
if (s.ok() && cfd_->IsDropped()) {
s = Status::ColumnFamilyDropped("Column family dropped during compaction");
}
if ((s.ok() || s.IsColumnFamilyDropped()) &&
shutting_down_->load(std::memory_order_acquire)) {
s = Status::ShutdownInProgress("Database shutdown");
}
if (!s.ok()) {
cfd_->imm()->RollbackMemtableFlush(mems_, meta_.fd.GetNumber());
} else if (write_manifest_) {
TEST_SYNC_POINT("FlushJob::InstallResults");
// Replace immutable memtable with the generated Table
IOStatus tmp_io_s;
s = cfd_->imm()->TryInstallMemtableFlushResults(
cfd_, mutable_cf_options_, mems_, prep_tracker, versions_, db_mutex_,
meta_.fd.GetNumber(), &job_context_->memtables_to_free, db_directory_,
log_buffer_, &committed_flush_jobs_info_, &tmp_io_s);
if (!tmp_io_s.ok()) {
io_status_ = tmp_io_s;
}
}
if (s.ok() && file_meta != nullptr) {
*file_meta = meta_;
}
RecordFlushIOStats();
// When measure_io_stats_ is true, the default 512 bytes is not enough.
auto stream = event_logger_->LogToBuffer(log_buffer_, 1024);
stream << "job" << job_context_->job_id << "event"
<< "flush_finished";
stream << "output_compression"
<< CompressionTypeToString(output_compression_);
stream << "lsm_state";
stream.StartArray();
auto vstorage = cfd_->current()->storage_info();
for (int level = 0; level < vstorage->num_levels(); ++level) {
stream << vstorage->NumLevelFiles(level);
}
stream.EndArray();
const auto& blob_files = vstorage->GetBlobFiles();
if (!blob_files.empty()) {
stream << "blob_file_head" << blob_files.begin()->first;
stream << "blob_file_tail" << blob_files.rbegin()->first;
}
stream << "immutable_memtables" << cfd_->imm()->NumNotFlushed();
if (measure_io_stats_) {
if (prev_perf_level != PerfLevel::kEnableTime) {
SetPerfLevel(prev_perf_level);
}
stream << "file_write_nanos" << (IOSTATS(write_nanos) - prev_write_nanos);
stream << "file_range_sync_nanos"
<< (IOSTATS(range_sync_nanos) - prev_range_sync_nanos);
stream << "file_fsync_nanos" << (IOSTATS(fsync_nanos) - prev_fsync_nanos);
stream << "file_prepare_write_nanos"
<< (IOSTATS(prepare_write_nanos) - prev_prepare_write_nanos);
stream << "file_cpu_write_nanos"
<< (IOSTATS(cpu_write_nanos) - prev_cpu_write_nanos);
stream << "file_cpu_read_nanos"
<< (IOSTATS(cpu_read_nanos) - prev_cpu_read_nanos);
}
return s;
}
void FlushJob::Cancel() {
db_mutex_->AssertHeld();
assert(base_ != nullptr);
base_->Unref();
}
Status FlushJob::WriteLevel0Table() {
AutoThreadOperationStageUpdater stage_updater(
ThreadStatus::STAGE_FLUSH_WRITE_L0);
db_mutex_->AssertHeld();
const uint64_t start_micros = clock_->NowMicros();
const uint64_t start_cpu_micros = clock_->CPUNanos() / 1000;
Status s;
std::vector<BlobFileAddition> blob_file_additions;
{
auto write_hint = cfd_->CalculateSSTWriteHint(0);
db_mutex_->Unlock();
if (log_buffer_) {
log_buffer_->FlushBufferToLog();
}
// memtables and range_del_iters store internal iterators over each data
// memtable and its associated range deletion memtable, respectively, at
// corresponding indexes.
std::vector<InternalIterator*> memtables;
std::vector<std::unique_ptr<FragmentedRangeTombstoneIterator>>
range_del_iters;
ReadOptions ro;
ro.total_order_seek = true;
Arena arena;
uint64_t total_num_entries = 0, total_num_deletes = 0;
uint64_t total_data_size = 0;
size_t total_memory_usage = 0;
for (MemTable* m : mems_) {
ROCKS_LOG_INFO(
db_options_.info_log,
"[%s] [JOB %d] Flushing memtable with next log file: %" PRIu64 "\n",
cfd_->GetName().c_str(), job_context_->job_id, m->GetNextLogNumber());
memtables.push_back(m->NewIterator(ro, &arena));
auto* range_del_iter =
m->NewRangeTombstoneIterator(ro, kMaxSequenceNumber);
if (range_del_iter != nullptr) {
range_del_iters.emplace_back(range_del_iter);
}
total_num_entries += m->num_entries();
total_num_deletes += m->num_deletes();
total_data_size += m->get_data_size();
total_memory_usage += m->ApproximateMemoryUsage();
}
event_logger_->Log() << "job" << job_context_->job_id << "event"
<< "flush_started"
<< "num_memtables" << mems_.size() << "num_entries"
<< total_num_entries << "num_deletes"
<< total_num_deletes << "total_data_size"
<< total_data_size << "memory_usage"
<< total_memory_usage << "flush_reason"
<< GetFlushReasonString(cfd_->GetFlushReason());
{
ScopedArenaIterator iter(
NewMergingIterator(&cfd_->internal_comparator(), &memtables[0],
static_cast<int>(memtables.size()), &arena));
ROCKS_LOG_INFO(db_options_.info_log,
"[%s] [JOB %d] Level-0 flush table #%" PRIu64 ": started",
cfd_->GetName().c_str(), job_context_->job_id,
meta_.fd.GetNumber());
TEST_SYNC_POINT_CALLBACK("FlushJob::WriteLevel0Table:output_compression",
&output_compression_);
int64_t _current_time = 0;
auto status = clock_->GetCurrentTime(&_current_time);
// Safe to proceed even if GetCurrentTime fails. So, log and proceed.
if (!status.ok()) {
ROCKS_LOG_WARN(
db_options_.info_log,
"Failed to get current time to populate creation_time property. "
"Status: %s",
status.ToString().c_str());
}
const uint64_t current_time = static_cast<uint64_t>(_current_time);
uint64_t oldest_key_time =
mems_.front()->ApproximateOldestKeyTime();
// It's not clear whether oldest_key_time is always available. In case
// it is not available, use current_time.
uint64_t oldest_ancester_time = std::min(current_time, oldest_key_time);
TEST_SYNC_POINT_CALLBACK(
"FlushJob::WriteLevel0Table:oldest_ancester_time",
&oldest_ancester_time);
meta_.oldest_ancester_time = oldest_ancester_time;
meta_.file_creation_time = current_time;
uint64_t creation_time = (cfd_->ioptions()->compaction_style ==
CompactionStyle::kCompactionStyleFIFO)
? current_time
: meta_.oldest_ancester_time;
uint64_t num_input_entries = 0;
uint64_t memtable_payload_bytes = 0;
uint64_t memtable_garbage_bytes = 0;
IOStatus io_s;
const std::string* const full_history_ts_low =
(full_history_ts_low_.empty()) ? nullptr : &full_history_ts_low_;
TableBuilderOptions tboptions(
*cfd_->ioptions(), mutable_cf_options_, cfd_->internal_comparator(),
cfd_->int_tbl_prop_collector_factories(), output_compression_,
mutable_cf_options_.compression_opts, cfd_->GetID(), cfd_->GetName(),
0 /* level */, false /* is_bottommost */,
TableFileCreationReason::kFlush, creation_time, oldest_key_time,
current_time, db_id_, db_session_id_, 0 /* target_file_size */,
meta_.fd.GetNumber());
s = BuildTable(
dbname_, versions_, db_options_, tboptions, file_options_,
cfd_->table_cache(), iter.get(), std::move(range_del_iters), &meta_,
&blob_file_additions, existing_snapshots_,
earliest_write_conflict_snapshot_, snapshot_checker_,
mutable_cf_options_.paranoid_file_checks, cfd_->internal_stats(),
&io_s, io_tracer_, event_logger_, job_context_->job_id, Env::IO_HIGH,
&table_properties_, write_hint, full_history_ts_low, blob_callback_,
&num_input_entries, &memtable_payload_bytes, &memtable_garbage_bytes);
if (!io_s.ok()) {
io_status_ = io_s;
}
if (num_input_entries != total_num_entries && s.ok()) {
std::string msg = "Expected " + ToString(total_num_entries) +
" entries in memtables, but read " +
ToString(num_input_entries);
ROCKS_LOG_WARN(db_options_.info_log, "[%s] [JOB %d] Level-0 flush %s",
cfd_->GetName().c_str(), job_context_->job_id,
msg.c_str());
if (db_options_.flush_verify_memtable_count) {
s = Status::Corruption(msg);
}
}
if (tboptions.reason == TableFileCreationReason::kFlush) {
RecordTick(stats_, MEMTABLE_PAYLOAD_BYTES_AT_FLUSH,
memtable_payload_bytes);
RecordTick(stats_, MEMTABLE_GARBAGE_BYTES_AT_FLUSH,
memtable_garbage_bytes);
}
LogFlush(db_options_.info_log);
}
ROCKS_LOG_INFO(db_options_.info_log,
"[%s] [JOB %d] Level-0 flush table #%" PRIu64 ": %" PRIu64
" bytes %s"
"%s",
cfd_->GetName().c_str(), job_context_->job_id,
meta_.fd.GetNumber(), meta_.fd.GetFileSize(),
s.ToString().c_str(),
meta_.marked_for_compaction ? " (needs compaction)" : "");
if (s.ok() && output_file_directory_ != nullptr && sync_output_directory_) {
s = output_file_directory_->Fsync(IOOptions(), nullptr);
}
TEST_SYNC_POINT_CALLBACK("FlushJob::WriteLevel0Table", &mems_);
db_mutex_->Lock();
}
base_->Unref();
// Note that if file_size is zero, the file has been deleted and
// should not be added to the manifest.
const bool has_output = meta_.fd.GetFileSize() > 0;
if (s.ok() && has_output) {
// if we have more than 1 background thread, then we cannot
// insert files directly into higher levels because some other
// threads could be concurrently producing compacted files for
// that key range.
// Add file to L0
edit_->AddFile(0 /* level */, meta_.fd.GetNumber(), meta_.fd.GetPathId(),
meta_.fd.GetFileSize(), meta_.smallest, meta_.largest,
meta_.fd.smallest_seqno, meta_.fd.largest_seqno,
meta_.marked_for_compaction, meta_.oldest_blob_file_number,
meta_.oldest_ancester_time, meta_.file_creation_time,
meta_.file_checksum, meta_.file_checksum_func_name);
edit_->SetBlobFileAdditions(std::move(blob_file_additions));
}
#ifndef ROCKSDB_LITE
// Piggyback FlushJobInfo on the first first flushed memtable.
mems_[0]->SetFlushJobInfo(GetFlushJobInfo());
#endif // !ROCKSDB_LITE
// Note that here we treat flush as level 0 compaction in internal stats
InternalStats::CompactionStats stats(CompactionReason::kFlush, 1);
stats.micros = clock_->NowMicros() - start_micros;
stats.cpu_micros = clock_->CPUNanos() / 1000 - start_cpu_micros;
if (has_output) {
stats.bytes_written = meta_.fd.GetFileSize();
stats.num_output_files = 1;
}
const auto& blobs = edit_->GetBlobFileAdditions();
for (const auto& blob : blobs) {
stats.bytes_written_blob += blob.GetTotalBlobBytes();
}
stats.num_output_files_blob = static_cast<int>(blobs.size());
RecordTimeToHistogram(stats_, FLUSH_TIME, stats.micros);
cfd_->internal_stats()->AddCompactionStats(0 /* level */, thread_pri_, stats);
cfd_->internal_stats()->AddCFStats(
InternalStats::BYTES_FLUSHED,
stats.bytes_written + stats.bytes_written_blob);
RecordFlushIOStats();
return s;
}
#ifndef ROCKSDB_LITE
std::unique_ptr<FlushJobInfo> FlushJob::GetFlushJobInfo() const {
db_mutex_->AssertHeld();
std::unique_ptr<FlushJobInfo> info(new FlushJobInfo{});
info->cf_id = cfd_->GetID();
info->cf_name = cfd_->GetName();
const uint64_t file_number = meta_.fd.GetNumber();
info->file_path =
MakeTableFileName(cfd_->ioptions()->cf_paths[0].path, file_number);
info->file_number = file_number;
info->oldest_blob_file_number = meta_.oldest_blob_file_number;
info->thread_id = db_options_.env->GetThreadID();
info->job_id = job_context_->job_id;
info->smallest_seqno = meta_.fd.smallest_seqno;
info->largest_seqno = meta_.fd.largest_seqno;
info->table_properties = table_properties_;
info->flush_reason = cfd_->GetFlushReason();
return info;
}
#endif // !ROCKSDB_LITE
} // namespace ROCKSDB_NAMESPACE