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rocksdb/db/flush_job.cc
Baptiste Lemaire e3a96c4823 Memtable sampling for mempurge heuristic. (#8628) 
Summary:
Changes the API of the MemPurge process: the `bool experimental_allow_mempurge` and `experimental_mempurge_policy` flags have been replaced by a `double experimental_mempurge_threshold` option.
This change of API reflects another major change introduced in this PR: the MemPurgeDecider() function now works by sampling the memtables being flushed to estimate the overall amount of useful payload (payload minus the garbage), and then compare this useful payload estimate with the `double experimental_mempurge_threshold` value.
Therefore, when the value of this flag is `0.0` (default value), mempurge is simply deactivated. On the other hand, a value of `DBL_MAX` would be equivalent to always going through a mempurge regardless of the garbage ratio estimate.
At the moment, a `double experimental_mempurge_threshold` value else than 0.0 or `DBL_MAX` is opnly supported`with the `SkipList` memtable representation.
Regarding the sampling, this PR includes the introduction of a `MemTable::UniqueRandomSample` function that collects (approximately) random entries from the memtable by using the new `SkipList::Iterator::RandomSeek()` under the hood, or by iterating through each memtable entry, depending on the target sample size and the total number of entries.
The unit tests have been readapted to support this new API.

Pull Request resolved: https://github.com/facebook/rocksdb/pull/8628

Reviewed By: pdillinger

Differential Revision: D30149315

Pulled By: bjlemaire

fbshipit-source-id: 1feef5390c95db6f4480ab4434716533d3947f27
2021-08-10 18:09:03 -07:00

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// Copyright (c) 2011-present, Facebook, Inc. All rights reserved.
// This source code is licensed under both the GPLv2 (found in the
// COPYING file in the root directory) and Apache 2.0 License
// (found in the LICENSE.Apache file in the root directory).
//
// Copyright (c) 2011 The LevelDB Authors. All rights reserved.
// Use of this source code is governed by a BSD-style license that can be
// found in the LICENSE file. See the AUTHORS file for names of contributors.
#include "db/flush_job.h"
#include <cinttypes>
#include <algorithm>
#include <vector>
#include "db/builder.h"
#include "db/db_iter.h"
#include "db/dbformat.h"
#include "db/event_helpers.h"
#include "db/log_reader.h"
#include "db/log_writer.h"
#include "db/memtable.h"
#include "db/memtable_list.h"
#include "db/merge_context.h"
#include "db/range_tombstone_fragmenter.h"
#include "db/version_set.h"
#include "file/file_util.h"
#include "file/filename.h"
#include "logging/event_logger.h"
#include "logging/log_buffer.h"
#include "logging/logging.h"
#include "monitoring/iostats_context_imp.h"
#include "monitoring/perf_context_imp.h"
#include "monitoring/thread_status_util.h"
#include "port/port.h"
#include "rocksdb/db.h"
#include "rocksdb/env.h"
#include "rocksdb/statistics.h"
#include "rocksdb/status.h"
#include "rocksdb/table.h"
#include "table/merging_iterator.h"
#include "table/table_builder.h"
#include "table/two_level_iterator.h"
#include "test_util/sync_point.h"
#include "util/coding.h"
#include "util/mutexlock.h"
#include "util/stop_watch.h"
namespace ROCKSDB_NAMESPACE {
const char* GetFlushReasonString (FlushReason flush_reason) {
switch (flush_reason) {
case FlushReason::kOthers:
return "Other Reasons";
case FlushReason::kGetLiveFiles:
return "Get Live Files";
case FlushReason::kShutDown:
return "Shut down";
case FlushReason::kExternalFileIngestion:
return "External File Ingestion";
case FlushReason::kManualCompaction:
return "Manual Compaction";
case FlushReason::kWriteBufferManager:
return "Write Buffer Manager";
case FlushReason::kWriteBufferFull:
return "Write Buffer Full";
case FlushReason::kTest:
return "Test";
case FlushReason::kDeleteFiles:
return "Delete Files";
case FlushReason::kAutoCompaction:
return "Auto Compaction";
case FlushReason::kManualFlush:
return "Manual Flush";
case FlushReason::kErrorRecovery:
return "Error Recovery";
case FlushReason::kWalFull:
return "WAL Full";
default:
return "Invalid";
}
}
FlushJob::FlushJob(
const std::string& dbname, ColumnFamilyData* cfd,
const ImmutableDBOptions& db_options,
const MutableCFOptions& mutable_cf_options, uint64_t max_memtable_id,
const FileOptions& file_options, VersionSet* versions,
InstrumentedMutex* db_mutex, std::atomic<bool>* shutting_down,
std::vector<SequenceNumber> existing_snapshots,
SequenceNumber earliest_write_conflict_snapshot,
SnapshotChecker* snapshot_checker, JobContext* job_context,
LogBuffer* log_buffer, FSDirectory* db_directory,
FSDirectory* output_file_directory, CompressionType output_compression,
Statistics* stats, EventLogger* event_logger, bool measure_io_stats,
const bool sync_output_directory, const bool write_manifest,
Env::Priority thread_pri, const std::shared_ptr<IOTracer>& io_tracer,
const std::string& db_id, const std::string& db_session_id,
std::string full_history_ts_low, BlobFileCompletionCallback* blob_callback)
: dbname_(dbname),
db_id_(db_id),
db_session_id_(db_session_id),
cfd_(cfd),
db_options_(db_options),
mutable_cf_options_(mutable_cf_options),
max_memtable_id_(max_memtable_id),
file_options_(file_options),
versions_(versions),
db_mutex_(db_mutex),
shutting_down_(shutting_down),
existing_snapshots_(std::move(existing_snapshots)),
earliest_write_conflict_snapshot_(earliest_write_conflict_snapshot),
snapshot_checker_(snapshot_checker),
job_context_(job_context),
log_buffer_(log_buffer),
db_directory_(db_directory),
output_file_directory_(output_file_directory),
output_compression_(output_compression),
stats_(stats),
event_logger_(event_logger),
measure_io_stats_(measure_io_stats),
sync_output_directory_(sync_output_directory),
write_manifest_(write_manifest),
edit_(nullptr),
base_(nullptr),
pick_memtable_called(false),
thread_pri_(thread_pri),
io_tracer_(io_tracer),
clock_(db_options_.clock),
full_history_ts_low_(std::move(full_history_ts_low)),
blob_callback_(blob_callback) {
// Update the thread status to indicate flush.
ReportStartedFlush();
TEST_SYNC_POINT("FlushJob::FlushJob()");
}
FlushJob::~FlushJob() {
io_status_.PermitUncheckedError();
ThreadStatusUtil::ResetThreadStatus();
}
void FlushJob::ReportStartedFlush() {
ThreadStatusUtil::SetColumnFamily(cfd_, cfd_->ioptions()->env,
db_options_.enable_thread_tracking);
ThreadStatusUtil::SetThreadOperation(ThreadStatus::OP_FLUSH);
ThreadStatusUtil::SetThreadOperationProperty(
ThreadStatus::COMPACTION_JOB_ID,
job_context_->job_id);
IOSTATS_RESET(bytes_written);
}
void FlushJob::ReportFlushInputSize(const autovector<MemTable*>& mems) {
uint64_t input_size = 0;
for (auto* mem : mems) {
input_size += mem->ApproximateMemoryUsage();
}
ThreadStatusUtil::IncreaseThreadOperationProperty(
ThreadStatus::FLUSH_BYTES_MEMTABLES,
input_size);
}
void FlushJob::RecordFlushIOStats() {
RecordTick(stats_, FLUSH_WRITE_BYTES, IOSTATS(bytes_written));
ThreadStatusUtil::IncreaseThreadOperationProperty(
ThreadStatus::FLUSH_BYTES_WRITTEN, IOSTATS(bytes_written));
IOSTATS_RESET(bytes_written);
}
void FlushJob::PickMemTable() {
db_mutex_->AssertHeld();
assert(!pick_memtable_called);
pick_memtable_called = true;
// Save the contents of the earliest memtable as a new Table
cfd_->imm()->PickMemtablesToFlush(max_memtable_id_, &mems_);
if (mems_.empty()) {
return;
}
ReportFlushInputSize(mems_);
// entries mems are (implicitly) sorted in ascending order by their created
// time. We will use the first memtable's `edit` to keep the meta info for
// this flush.
MemTable* m = mems_[0];
edit_ = m->GetEdits();
edit_->SetPrevLogNumber(0);
// SetLogNumber(log_num) indicates logs with number smaller than log_num
// will no longer be picked up for recovery.
edit_->SetLogNumber(mems_.back()->GetNextLogNumber());
edit_->SetColumnFamily(cfd_->GetID());
// path 0 for level 0 file.
meta_.fd = FileDescriptor(versions_->NewFileNumber(), 0, 0);
// If mempurge feature is activated, keep track of any potential
// memtables coming from a previous mempurge operation.
// Used for mempurge policy.
if (db_options_.experimental_mempurge_threshold > 0.0) {
contains_mempurge_outcome_ = false;
for (MemTable* mt : mems_) {
if (cfd_->imm()->IsMemPurgeOutput(mt->GetID())) {
contains_mempurge_outcome_ = true;
break;
}
}
}
base_ = cfd_->current();
base_->Ref(); // it is likely that we do not need this reference
}
Status FlushJob::Run(LogsWithPrepTracker* prep_tracker,
FileMetaData* file_meta) {
TEST_SYNC_POINT("FlushJob::Start");
db_mutex_->AssertHeld();
assert(pick_memtable_called);
AutoThreadOperationStageUpdater stage_run(
ThreadStatus::STAGE_FLUSH_RUN);
if (mems_.empty()) {
ROCKS_LOG_BUFFER(log_buffer_, "[%s] Nothing in memtable to flush",
cfd_->GetName().c_str());
return Status::OK();
}
// I/O measurement variables
PerfLevel prev_perf_level = PerfLevel::kEnableTime;
uint64_t prev_write_nanos = 0;
uint64_t prev_fsync_nanos = 0;
uint64_t prev_range_sync_nanos = 0;
uint64_t prev_prepare_write_nanos = 0;
uint64_t prev_cpu_write_nanos = 0;
uint64_t prev_cpu_read_nanos = 0;
if (measure_io_stats_) {
prev_perf_level = GetPerfLevel();
SetPerfLevel(PerfLevel::kEnableTime);
prev_write_nanos = IOSTATS(write_nanos);
prev_fsync_nanos = IOSTATS(fsync_nanos);
prev_range_sync_nanos = IOSTATS(range_sync_nanos);
prev_prepare_write_nanos = IOSTATS(prepare_write_nanos);
prev_cpu_write_nanos = IOSTATS(cpu_write_nanos);
prev_cpu_read_nanos = IOSTATS(cpu_read_nanos);
}
Status mempurge_s = Status::NotFound("No MemPurge.");
if ((db_options_.experimental_mempurge_threshold > 0.0) &&
(cfd_->GetFlushReason() == FlushReason::kWriteBufferFull) &&
(!mems_.empty()) && MemPurgeDecider()) {
mempurge_s = MemPurge();
if (!mempurge_s.ok()) {
// Mempurge is typically aborted when the new_mem output memtable
// is filled at more than XX % capacity (currently: 60%).
if (mempurge_s.IsAborted()) {
ROCKS_LOG_INFO(db_options_.info_log, "Mempurge process aborted: %s\n",
mempurge_s.ToString().c_str());
} else {
// However the mempurge process can also fail for
// other reasons (eg: new_mem->Add() fails).
ROCKS_LOG_WARN(db_options_.info_log, "Mempurge process failed: %s\n",
mempurge_s.ToString().c_str());
}
}
}
Status s;
if (mempurge_s.ok()) {
base_->Unref();
s = Status::OK();
} else {
// This will release and re-acquire the mutex.
s = WriteLevel0Table();
}
if (s.ok() && cfd_->IsDropped()) {
s = Status::ColumnFamilyDropped("Column family dropped during compaction");
}
if ((s.ok() || s.IsColumnFamilyDropped()) &&
shutting_down_->load(std::memory_order_acquire)) {
s = Status::ShutdownInProgress("Database shutdown");
}
if (!s.ok()) {
cfd_->imm()->RollbackMemtableFlush(mems_, meta_.fd.GetNumber());
} else if (write_manifest_) {
TEST_SYNC_POINT("FlushJob::InstallResults");
// Replace immutable memtable with the generated Table
IOStatus tmp_io_s;
s = cfd_->imm()->TryInstallMemtableFlushResults(
cfd_, mutable_cf_options_, mems_, prep_tracker, versions_, db_mutex_,
meta_.fd.GetNumber(), &job_context_->memtables_to_free, db_directory_,
log_buffer_, &committed_flush_jobs_info_, &tmp_io_s,
!(mempurge_s.ok()) /* write_edit : true if no mempurge happened (or if aborted),
but 'false' if mempurge successful: no new min log number
or new level 0 file path to write to manifest. */);
if (!tmp_io_s.ok()) {
io_status_ = tmp_io_s;
}
}
if (s.ok() && file_meta != nullptr) {
*file_meta = meta_;
}
RecordFlushIOStats();
// When measure_io_stats_ is true, the default 512 bytes is not enough.
auto stream = event_logger_->LogToBuffer(log_buffer_, 1024);
stream << "job" << job_context_->job_id << "event"
<< "flush_finished";
stream << "output_compression"
<< CompressionTypeToString(output_compression_);
stream << "lsm_state";
stream.StartArray();
auto vstorage = cfd_->current()->storage_info();
for (int level = 0; level < vstorage->num_levels(); ++level) {
stream << vstorage->NumLevelFiles(level);
}
stream.EndArray();
const auto& blob_files = vstorage->GetBlobFiles();
if (!blob_files.empty()) {
stream << "blob_file_head" << blob_files.begin()->first;
stream << "blob_file_tail" << blob_files.rbegin()->first;
}
stream << "immutable_memtables" << cfd_->imm()->NumNotFlushed();
if (measure_io_stats_) {
if (prev_perf_level != PerfLevel::kEnableTime) {
SetPerfLevel(prev_perf_level);
}
stream << "file_write_nanos" << (IOSTATS(write_nanos) - prev_write_nanos);
stream << "file_range_sync_nanos"
<< (IOSTATS(range_sync_nanos) - prev_range_sync_nanos);
stream << "file_fsync_nanos" << (IOSTATS(fsync_nanos) - prev_fsync_nanos);
stream << "file_prepare_write_nanos"
<< (IOSTATS(prepare_write_nanos) - prev_prepare_write_nanos);
stream << "file_cpu_write_nanos"
<< (IOSTATS(cpu_write_nanos) - prev_cpu_write_nanos);
stream << "file_cpu_read_nanos"
<< (IOSTATS(cpu_read_nanos) - prev_cpu_read_nanos);
}
return s;
}
void FlushJob::Cancel() {
db_mutex_->AssertHeld();
assert(base_ != nullptr);
base_->Unref();
}
Status FlushJob::MemPurge() {
Status s;
db_mutex_->AssertHeld();
db_mutex_->Unlock();
assert(!mems_.empty());
// Measure purging time.
const uint64_t start_micros = clock_->NowMicros();
const uint64_t start_cpu_micros = clock_->CPUNanos() / 1000;
MemTable* new_mem = nullptr;
// For performance/log investigation purposes:
// look at how much useful payload we harvest in the new_mem.
// This value is then printed to the DB log.
double new_mem_capacity = 0.0;
// Create two iterators, one for the memtable data (contains
// info from puts + deletes), and one for the memtable
// Range Tombstones (from DeleteRanges).
ReadOptions ro;
ro.total_order_seek = true;
Arena arena;
std::vector<InternalIterator*> memtables;
std::vector<std::unique_ptr<FragmentedRangeTombstoneIterator>>
range_del_iters;
for (MemTable* m : mems_) {
memtables.push_back(m->NewIterator(ro, &arena));
auto* range_del_iter = m->NewRangeTombstoneIterator(ro, kMaxSequenceNumber);
if (range_del_iter != nullptr) {
range_del_iters.emplace_back(range_del_iter);
}
}
assert(!memtables.empty());
SequenceNumber first_seqno = kMaxSequenceNumber;
SequenceNumber earliest_seqno = kMaxSequenceNumber;
// Pick first and earliest seqno as min of all first_seqno
// and earliest_seqno of the mempurged memtables.
for (const auto& mem : mems_) {
first_seqno = mem->GetFirstSequenceNumber() < first_seqno
? mem->GetFirstSequenceNumber()
: first_seqno;
earliest_seqno = mem->GetEarliestSequenceNumber() < earliest_seqno
? mem->GetEarliestSequenceNumber()
: earliest_seqno;
}
ScopedArenaIterator iter(
NewMergingIterator(&(cfd_->internal_comparator()), memtables.data(),
static_cast<int>(memtables.size()), &arena));
auto* ioptions = cfd_->ioptions();
// Place iterator at the First (meaning most recent) key node.
iter->SeekToFirst();
std::unique_ptr<CompactionRangeDelAggregator> range_del_agg(
new CompactionRangeDelAggregator(&(cfd_->internal_comparator()),
existing_snapshots_));
for (auto& rd_iter : range_del_iters) {
range_del_agg->AddTombstones(std::move(rd_iter));
}
// If there is valid data in the memtable,
// or at least range tombstones, copy over the info
// to the new memtable.
if (iter->Valid() || !range_del_agg->IsEmpty()) {
// MaxSize is the size of a memtable.
size_t maxSize = mutable_cf_options_.write_buffer_size;
std::unique_ptr<CompactionFilter> compaction_filter;
if (ioptions->compaction_filter_factory != nullptr &&
ioptions->compaction_filter_factory->ShouldFilterTableFileCreation(
TableFileCreationReason::kFlush)) {
CompactionFilter::Context ctx;
ctx.is_full_compaction = false;
ctx.is_manual_compaction = false;
ctx.column_family_id = cfd_->GetID();
ctx.reason = TableFileCreationReason::kFlush;
compaction_filter =
ioptions->compaction_filter_factory->CreateCompactionFilter(ctx);
if (compaction_filter != nullptr &&
!compaction_filter->IgnoreSnapshots()) {
s = Status::NotSupported(
"CompactionFilter::IgnoreSnapshots() = false is not supported "
"anymore.");
return s;
}
}
new_mem = new MemTable((cfd_->internal_comparator()), *(cfd_->ioptions()),
mutable_cf_options_, cfd_->write_buffer_mgr(),
earliest_seqno, cfd_->GetID());
assert(new_mem != nullptr);
Env* env = db_options_.env;
assert(env);
MergeHelper merge(
env, (cfd_->internal_comparator()).user_comparator(),
(ioptions->merge_operator).get(), compaction_filter.get(),
ioptions->logger, true /* internal key corruption is not ok */,
existing_snapshots_.empty() ? 0 : existing_snapshots_.back(),
snapshot_checker_);
CompactionIterator c_iter(
iter.get(), (cfd_->internal_comparator()).user_comparator(), &merge,
kMaxSequenceNumber, &existing_snapshots_,
earliest_write_conflict_snapshot_, snapshot_checker_, env,
ShouldReportDetailedTime(env, ioptions->stats),
true /* internal key corruption is not ok */, range_del_agg.get(),
nullptr, ioptions->allow_data_in_errors,
/*compaction=*/nullptr, compaction_filter.get(),
/*shutting_down=*/nullptr,
/*preserve_deletes_seqnum=*/0, /*manual_compaction_paused=*/nullptr,
/*manual_compaction_canceled=*/nullptr, ioptions->info_log,
&(cfd_->GetFullHistoryTsLow()));
// Set earliest sequence number in the new memtable
// to be equal to the earliest sequence number of the
// memtable being flushed (See later if there is a need
// to update this number!).
new_mem->SetEarliestSequenceNumber(earliest_seqno);
// Likewise for first seq number.
new_mem->SetFirstSequenceNumber(first_seqno);
SequenceNumber new_first_seqno = kMaxSequenceNumber;
c_iter.SeekToFirst();
// Key transfer
for (; c_iter.Valid(); c_iter.Next()) {
const ParsedInternalKey ikey = c_iter.ikey();
const Slice value = c_iter.value();
new_first_seqno =
ikey.sequence < new_first_seqno ? ikey.sequence : new_first_seqno;
// Should we update "OldestKeyTime" ???? -> timestamp appear
// to still be an "experimental" feature.
s = new_mem->Add(
ikey.sequence, ikey.type, ikey.user_key, value,
nullptr, // KV protection info set as nullptr since it
// should only be useful for the first add to
// the original memtable.
false, // : allow concurrent_memtable_writes_
// Not seen as necessary for now.
nullptr, // get_post_process_info(m) must be nullptr
// when concurrent_memtable_writes is switched off.
nullptr); // hint, only used when concurrent_memtable_writes_
// is switched on.
if (!s.ok()) {
break;
}
// If new_mem has size greater than maxSize,
// then rollback to regular flush operation,
// and destroy new_mem.
if (new_mem->ApproximateMemoryUsage() > maxSize) {
s = Status::Aborted("Mempurge filled more than one memtable.");
new_mem_capacity = 1.0;
break;
}
}
// Check status and propagate
// potential error status from c_iter
if (!s.ok()) {
c_iter.status().PermitUncheckedError();
} else if (!c_iter.status().ok()) {
s = c_iter.status();
}
// Range tombstone transfer.
if (s.ok()) {
auto range_del_it = range_del_agg->NewIterator();
for (range_del_it->SeekToFirst(); range_del_it->Valid();
range_del_it->Next()) {
auto tombstone = range_del_it->Tombstone();
new_first_seqno =
tombstone.seq_ < new_first_seqno ? tombstone.seq_ : new_first_seqno;
s = new_mem->Add(
tombstone.seq_, // Sequence number
kTypeRangeDeletion, // KV type
tombstone.start_key_, // Key is start key.
tombstone.end_key_, // Value is end key.
nullptr, // KV protection info set as nullptr since it
// should only be useful for the first add to
// the original memtable.
false, // : allow concurrent_memtable_writes_
// Not seen as necessary for now.
nullptr, // get_post_process_info(m) must be nullptr
// when concurrent_memtable_writes is switched off.
nullptr); // hint, only used when concurrent_memtable_writes_
// is switched on.
if (!s.ok()) {
break;
}
// If new_mem has size greater than maxSize,
// then rollback to regular flush operation,
// and destroy new_mem.
if (new_mem->ApproximateMemoryUsage() > maxSize) {
s = Status::Aborted(Slice("Mempurge filled more than one memtable."));
new_mem_capacity = 1.0;
break;
}
}
}
// If everything happened smoothly and new_mem contains valid data,
// decide if it is flushed to storage or kept in the imm()
// memtable list (memory).
if (s.ok() && (new_first_seqno != kMaxSequenceNumber)) {
// Rectify the first sequence number, which (unlike the earliest seq
// number) needs to be present in the new memtable.
new_mem->SetFirstSequenceNumber(new_first_seqno);
// The new_mem is added to the list of immutable memtables
// only if it filled at less than 100% capacity and isn't flagged
// as in need of being flushed.
if (new_mem->ApproximateMemoryUsage() < maxSize &&
!(new_mem->ShouldFlushNow())) {
db_mutex_->Lock();
uint64_t new_mem_id = mems_[0]->GetID();
// Copy lowest memtable ID
// House keeping work.
for (MemTable* mt : mems_) {
new_mem_id = mt->GetID() < new_mem_id ? mt->GetID() : new_mem_id;
// Note: if m is not a previous mempurge output memtable,
// nothing happens.
cfd_->imm()->RemoveMemPurgeOutputID(mt->GetID());
}
new_mem->SetID(new_mem_id);
cfd_->imm()->AddMemPurgeOutputID(new_mem_id);
// This addition will not trigger another flush, because
// we do not call SchedulePendingFlush().
cfd_->imm()->Add(new_mem, &job_context_->memtables_to_free);
new_mem->Ref();
db_mutex_->Unlock();
} else {
s = Status::Aborted(Slice("Mempurge filled more than one memtable."));
new_mem_capacity = 1.0;
if (new_mem) {
job_context_->memtables_to_free.push_back(new_mem);
}
}
} else {
// In this case, the newly allocated new_mem is empty.
assert(new_mem != nullptr);
job_context_->memtables_to_free.push_back(new_mem);
}
}
// Reacquire the mutex for WriteLevel0 function.
db_mutex_->Lock();
// If mempurge successful, don't write input tables to level0,
// but write any full output table to level0.
if (s.ok()) {
TEST_SYNC_POINT("DBImpl::FlushJob:MemPurgeSuccessful");
} else {
TEST_SYNC_POINT("DBImpl::FlushJob:MemPurgeUnsuccessful");
}
const uint64_t micros = clock_->NowMicros() - start_micros;
const uint64_t cpu_micros = clock_->CPUNanos() / 1000 - start_cpu_micros;
ROCKS_LOG_INFO(db_options_.info_log,
"[%s] [JOB %d] Mempurge lasted %" PRIu64
" microseconds, and %" PRIu64
" cpu "
"microseconds. Status is %s ok. Perc capacity: %f\n",
cfd_->GetName().c_str(), job_context_->job_id, micros,
cpu_micros, s.ok() ? "" : "not", new_mem_capacity);
return s;
}
bool FlushJob::MemPurgeDecider() {
double threshold = db_options_.experimental_mempurge_threshold;
// Never trigger mempurge if threshold is not a strictly positive value.
if (!(threshold > 0.0)) {
return false;
}
if (threshold > (1.0 * mems_.size())) {
return true;
}
// Payload and useful_payload (in bytes).
// The useful payload ratio of a given MemTable
// is estimated to be useful_payload/payload.
uint64_t payload = 0, useful_payload = 0;
// If estimated_useful_payload is > threshold,
// then flush to storage, else MemPurge.
double estimated_useful_payload = 0.0;
// Cochran formula for determining sample size.
// 95% confidence interval, 7% precision.
// n0 = (1.96*1.96)*0.25/(0.07*0.07) = 196.0
double n0 = 196.0;
ReadOptions ro;
ro.total_order_seek = true;
// Iterate over each memtable of the set.
for (MemTable* mt : mems_) {
// If the memtable is the output of a previous mempurge,
// its approximate useful payload ratio is already calculated.
if (cfd_->imm()->IsMemPurgeOutput(mt->GetID())) {
// We make the assumption that this memtable is already
// free of garbage (garbage underestimation).
estimated_useful_payload += mt->ApproximateMemoryUsage();
} else {
// Else sample from the table.
uint64_t nentries = mt->num_entries();
// Corrected Cochran formula for small populations
// (converges to n0 for large populations).
uint64_t target_sample_size =
static_cast<uint64_t>(ceil(n0 / (1.0 + (n0 / nentries))));
std::unordered_set<const char*> sentries = {};
// Populate sample entries set.
mt->UniqueRandomSample(target_sample_size, &sentries);
// Estimate the garbage ratio by comparing if
// each sample corresponds to a valid entry.
for (const char* ss : sentries) {
ParsedInternalKey res;
Slice entry_slice = GetLengthPrefixedSlice(ss);
Status parse_s =
ParseInternalKey(entry_slice, &res, true /*log_err_key*/);
if (!parse_s.ok()) {
ROCKS_LOG_WARN(db_options_.info_log,
"Memtable Decider: ParseInternalKey did not parse "
"entry_slice %s"
"successfully.",
entry_slice.data());
}
LookupKey lkey(res.user_key, kMaxSequenceNumber);
std::string vget;
Status s;
MergeContext merge_context;
SequenceNumber max_covering_tombstone_seq = 0, sqno = 0;
// Pick the oldest existing snapshot that is more recent
// than the sequence number of the sampled entry.
SequenceNumber min_seqno_snapshot = kMaxSequenceNumber;
SnapshotImpl min_snapshot;
for (SequenceNumber seq_num : existing_snapshots_) {
if (seq_num > res.sequence && seq_num < min_seqno_snapshot) {
min_seqno_snapshot = seq_num;
}
}
min_snapshot.number_ = min_seqno_snapshot;
ro.snapshot =
min_seqno_snapshot < kMaxSequenceNumber ? &min_snapshot : nullptr;
// Estimate if the sample entry is valid or not.
bool gres = mt->Get(lkey, &vget, nullptr, &s, &merge_context,
&max_covering_tombstone_seq, &sqno, ro);
if (!gres) {
ROCKS_LOG_WARN(
db_options_.info_log,
"Memtable Get returned false when Get(sampled entry). "
"Yet each sample entry should exist somewhere in the memtable, "
"unrelated to whether it has been deleted or not.");
}
payload += entry_slice.size();
// TODO(bjlemaire): evaluate typeMerge.
// This is where the sampled entry is estimated to be
// garbage or not. Note that this is a garbage *estimation*
// because we do not include certain items such as
// CompactionFitlers triggered at flush, or if the same delete
// has been inserted twice or more in the memtable.
if (res.type == kTypeValue && gres && s.ok() && sqno == res.sequence) {
useful_payload += entry_slice.size();
} else if (((res.type == kTypeDeletion) ||
(res.type == kTypeSingleDeletion)) &&
s.IsNotFound() && gres) {
useful_payload += entry_slice.size();
}
}
if (payload > 0) {
// We used the estimated useful payload ratio
// to evaluate how much of the total memtable is useful bytes.
estimated_useful_payload +=
(mt->ApproximateMemoryUsage()) * (useful_payload * 1.0 / payload);
ROCKS_LOG_INFO(
db_options_.info_log,
"Mempurge sampling - found garbage ratio from sampling: %f.\n",
(payload - useful_payload) * 1.0 / payload);
} else {
ROCKS_LOG_WARN(
db_options_.info_log,
"Mempurge kSampling policy: null payload measured, and collected "
"sample size is %zu\n.",
sentries.size());
}
}
}
// We convert the total number of useful paylaod bytes
// into the proportion of memtable necessary to store all these bytes.
// We compare this proportion with the threshold value.
return (estimated_useful_payload / mutable_cf_options_.write_buffer_size) <
threshold;
}
Status FlushJob::WriteLevel0Table() {
AutoThreadOperationStageUpdater stage_updater(
ThreadStatus::STAGE_FLUSH_WRITE_L0);
db_mutex_->AssertHeld();
const uint64_t start_micros = clock_->NowMicros();
const uint64_t start_cpu_micros = clock_->CPUNanos() / 1000;
Status s;
std::vector<BlobFileAddition> blob_file_additions;
{
auto write_hint = cfd_->CalculateSSTWriteHint(0);
db_mutex_->Unlock();
if (log_buffer_) {
log_buffer_->FlushBufferToLog();
}
// memtables and range_del_iters store internal iterators over each data
// memtable and its associated range deletion memtable, respectively, at
// corresponding indexes.
std::vector<InternalIterator*> memtables;
std::vector<std::unique_ptr<FragmentedRangeTombstoneIterator>>
range_del_iters;
ReadOptions ro;
ro.total_order_seek = true;
Arena arena;
uint64_t total_num_entries = 0, total_num_deletes = 0;
uint64_t total_data_size = 0;
size_t total_memory_usage = 0;
for (MemTable* m : mems_) {
ROCKS_LOG_INFO(
db_options_.info_log,
"[%s] [JOB %d] Flushing memtable with next log file: %" PRIu64 "\n",
cfd_->GetName().c_str(), job_context_->job_id, m->GetNextLogNumber());
memtables.push_back(m->NewIterator(ro, &arena));
auto* range_del_iter =
m->NewRangeTombstoneIterator(ro, kMaxSequenceNumber);
if (range_del_iter != nullptr) {
range_del_iters.emplace_back(range_del_iter);
}
total_num_entries += m->num_entries();
total_num_deletes += m->num_deletes();
total_data_size += m->get_data_size();
total_memory_usage += m->ApproximateMemoryUsage();
}
event_logger_->Log() << "job" << job_context_->job_id << "event"
<< "flush_started"
<< "num_memtables" << mems_.size() << "num_entries"
<< total_num_entries << "num_deletes"
<< total_num_deletes << "total_data_size"
<< total_data_size << "memory_usage"
<< total_memory_usage << "flush_reason"
<< GetFlushReasonString(cfd_->GetFlushReason());
{
ScopedArenaIterator iter(
NewMergingIterator(&cfd_->internal_comparator(), memtables.data(),
static_cast<int>(memtables.size()), &arena));
ROCKS_LOG_INFO(db_options_.info_log,
"[%s] [JOB %d] Level-0 flush table #%" PRIu64 ": started",
cfd_->GetName().c_str(), job_context_->job_id,
meta_.fd.GetNumber());
TEST_SYNC_POINT_CALLBACK("FlushJob::WriteLevel0Table:output_compression",
&output_compression_);
int64_t _current_time = 0;
auto status = clock_->GetCurrentTime(&_current_time);
// Safe to proceed even if GetCurrentTime fails. So, log and proceed.
if (!status.ok()) {
ROCKS_LOG_WARN(
db_options_.info_log,
"Failed to get current time to populate creation_time property. "
"Status: %s",
status.ToString().c_str());
}
const uint64_t current_time = static_cast<uint64_t>(_current_time);
uint64_t oldest_key_time =
mems_.front()->ApproximateOldestKeyTime();
// It's not clear whether oldest_key_time is always available. In case
// it is not available, use current_time.
uint64_t oldest_ancester_time = std::min(current_time, oldest_key_time);
TEST_SYNC_POINT_CALLBACK(
"FlushJob::WriteLevel0Table:oldest_ancester_time",
&oldest_ancester_time);
meta_.oldest_ancester_time = oldest_ancester_time;
meta_.file_creation_time = current_time;
uint64_t creation_time = (cfd_->ioptions()->compaction_style ==
CompactionStyle::kCompactionStyleFIFO)
? current_time
: meta_.oldest_ancester_time;
uint64_t num_input_entries = 0;
uint64_t memtable_payload_bytes = 0;
uint64_t memtable_garbage_bytes = 0;
IOStatus io_s;
const std::string* const full_history_ts_low =
(full_history_ts_low_.empty()) ? nullptr : &full_history_ts_low_;
TableBuilderOptions tboptions(
*cfd_->ioptions(), mutable_cf_options_, cfd_->internal_comparator(),
cfd_->int_tbl_prop_collector_factories(), output_compression_,
mutable_cf_options_.compression_opts, cfd_->GetID(), cfd_->GetName(),
0 /* level */, false /* is_bottommost */,
TableFileCreationReason::kFlush, creation_time, oldest_key_time,
current_time, db_id_, db_session_id_, 0 /* target_file_size */,
meta_.fd.GetNumber());
s = BuildTable(
dbname_, versions_, db_options_, tboptions, file_options_,
cfd_->table_cache(), iter.get(), std::move(range_del_iters), &meta_,
&blob_file_additions, existing_snapshots_,
earliest_write_conflict_snapshot_, snapshot_checker_,
mutable_cf_options_.paranoid_file_checks, cfd_->internal_stats(),
&io_s, io_tracer_, event_logger_, job_context_->job_id, Env::IO_HIGH,
&table_properties_, write_hint, full_history_ts_low, blob_callback_,
&num_input_entries, &memtable_payload_bytes, &memtable_garbage_bytes);
if (!io_s.ok()) {
io_status_ = io_s;
}
if (num_input_entries != total_num_entries && s.ok()) {
std::string msg = "Expected " + ToString(total_num_entries) +
" entries in memtables, but read " +
ToString(num_input_entries);
ROCKS_LOG_WARN(db_options_.info_log, "[%s] [JOB %d] Level-0 flush %s",
cfd_->GetName().c_str(), job_context_->job_id,
msg.c_str());
if (db_options_.flush_verify_memtable_count) {
s = Status::Corruption(msg);
}
}
if (tboptions.reason == TableFileCreationReason::kFlush) {
TEST_SYNC_POINT("DBImpl::FlushJob:Flush");
RecordTick(stats_, MEMTABLE_PAYLOAD_BYTES_AT_FLUSH,
memtable_payload_bytes);
RecordTick(stats_, MEMTABLE_GARBAGE_BYTES_AT_FLUSH,
memtable_garbage_bytes);
}
LogFlush(db_options_.info_log);
}
ROCKS_LOG_INFO(db_options_.info_log,
"[%s] [JOB %d] Level-0 flush table #%" PRIu64 ": %" PRIu64
" bytes %s"
"%s",
cfd_->GetName().c_str(), job_context_->job_id,
meta_.fd.GetNumber(), meta_.fd.GetFileSize(),
s.ToString().c_str(),
meta_.marked_for_compaction ? " (needs compaction)" : "");
if (s.ok() && output_file_directory_ != nullptr && sync_output_directory_) {
s = output_file_directory_->Fsync(IOOptions(), nullptr);
}
TEST_SYNC_POINT_CALLBACK("FlushJob::WriteLevel0Table", &mems_);
db_mutex_->Lock();
}
base_->Unref();
// Note that if file_size is zero, the file has been deleted and
// should not be added to the manifest.
const bool has_output = meta_.fd.GetFileSize() > 0;
if (s.ok() && has_output) {
TEST_SYNC_POINT("DBImpl::FlushJob:SSTFileCreated");
// if we have more than 1 background thread, then we cannot
// insert files directly into higher levels because some other
// threads could be concurrently producing compacted files for
// that key range.
// Add file to L0
edit_->AddFile(0 /* level */, meta_.fd.GetNumber(), meta_.fd.GetPathId(),
meta_.fd.GetFileSize(), meta_.smallest, meta_.largest,
meta_.fd.smallest_seqno, meta_.fd.largest_seqno,
meta_.marked_for_compaction, meta_.oldest_blob_file_number,
meta_.oldest_ancester_time, meta_.file_creation_time,
meta_.file_checksum, meta_.file_checksum_func_name);
edit_->SetBlobFileAdditions(std::move(blob_file_additions));
}
#ifndef ROCKSDB_LITE
// Piggyback FlushJobInfo on the first first flushed memtable.
mems_[0]->SetFlushJobInfo(GetFlushJobInfo());
#endif // !ROCKSDB_LITE
// Note that here we treat flush as level 0 compaction in internal stats
InternalStats::CompactionStats stats(CompactionReason::kFlush, 1);
const uint64_t micros = clock_->NowMicros() - start_micros;
const uint64_t cpu_micros = clock_->CPUNanos() / 1000 - start_cpu_micros;
stats.micros = micros;
stats.cpu_micros = cpu_micros;
ROCKS_LOG_INFO(db_options_.info_log,
"[%s] [JOB %d] Flush lasted %" PRIu64
" microseconds, and %" PRIu64 " cpu microseconds.\n",
cfd_->GetName().c_str(), job_context_->job_id, micros,
cpu_micros);
if (has_output) {
stats.bytes_written = meta_.fd.GetFileSize();
stats.num_output_files = 1;
}
const auto& blobs = edit_->GetBlobFileAdditions();
for (const auto& blob : blobs) {
stats.bytes_written_blob += blob.GetTotalBlobBytes();
}
stats.num_output_files_blob = static_cast<int>(blobs.size());
if ((db_options_.experimental_mempurge_threshold > 0.0) && s.ok()) {
// The db_mutex is held at this point.
for (MemTable* mt : mems_) {
// Note: if m is not a previous mempurge output memtable,
// nothing happens here.
cfd_->imm()->RemoveMemPurgeOutputID(mt->GetID());
}
}
RecordTimeToHistogram(stats_, FLUSH_TIME, stats.micros);
cfd_->internal_stats()->AddCompactionStats(0 /* level */, thread_pri_, stats);
cfd_->internal_stats()->AddCFStats(
InternalStats::BYTES_FLUSHED,
stats.bytes_written + stats.bytes_written_blob);
RecordFlushIOStats();
return s;
}
#ifndef ROCKSDB_LITE
std::unique_ptr<FlushJobInfo> FlushJob::GetFlushJobInfo() const {
db_mutex_->AssertHeld();
std::unique_ptr<FlushJobInfo> info(new FlushJobInfo{});
info->cf_id = cfd_->GetID();
info->cf_name = cfd_->GetName();
const uint64_t file_number = meta_.fd.GetNumber();
info->file_path =
MakeTableFileName(cfd_->ioptions()->cf_paths[0].path, file_number);
info->file_number = file_number;
info->oldest_blob_file_number = meta_.oldest_blob_file_number;
info->thread_id = db_options_.env->GetThreadID();
info->job_id = job_context_->job_id;
info->smallest_seqno = meta_.fd.smallest_seqno;
info->largest_seqno = meta_.fd.largest_seqno;
info->table_properties = table_properties_;
info->flush_reason = cfd_->GetFlushReason();
return info;
}
#endif // !ROCKSDB_LITE
} // namespace ROCKSDB_NAMESPACE
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