Removed blocks logic
This commit is contained in:
parent
d047d1b24a
commit
7fd7497464
@ -1,7 +1,5 @@
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package it.cavallium.strangedb.database;
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import it.cavallium.strangedb.database.blocks.DatabaseBlocksIO;
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import it.cavallium.strangedb.database.blocks.DatabaseBlocksMetadata;
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import it.cavallium.strangedb.database.references.DatabaseReferencesIO;
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import it.cavallium.strangedb.database.references.DatabaseReferencesMetadata;
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import it.cavallium.strangedb.database.references.ReferenceInfo;
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@ -17,33 +15,24 @@ import static it.cavallium.strangedb.database.references.DatabaseReferencesMetad
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public class DatabaseCore implements IDatabase {
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private final DatabaseFileIO fileIO;
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private final DatabaseBlocksIO blocksIO;
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protected final DatabaseBlocksMetadata blocksMetadata;
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protected final DatabaseReferencesIO referencesIO;
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protected final DatabaseReferencesMetadata referencesMetadata;
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protected final Path dataFile;
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protected final Path blocksMetaFile;
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protected final Path referencesMetaFile;
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protected volatile boolean closed;
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public DatabaseCore(Path dataFile, Path blocksMetaFile, Path referencesMetaFile) throws IOException {
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public DatabaseCore(Path dataFile, Path referencesMetaFile) throws IOException {
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if (Files.notExists(dataFile)) {
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Files.createFile(dataFile);
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}
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if (Files.notExists(blocksMetaFile)) {
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Files.createFile(blocksMetaFile);
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}
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if (Files.notExists(referencesMetaFile)) {
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Files.createFile(referencesMetaFile);
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}
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this.dataFile = dataFile;
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this.blocksMetaFile = blocksMetaFile;
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this.referencesMetaFile = referencesMetaFile;
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this.fileIO = new DatabaseFileIO(dataFile);
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this.blocksMetadata = new DatabaseBlocksMetadata(blocksMetaFile);
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this.blocksIO = new DatabaseBlocksIO(fileIO, blocksMetadata);
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this.referencesMetadata = new DatabaseReferencesMetadata(referencesMetaFile);
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this.referencesIO = new DatabaseReferencesIO(blocksIO, referencesMetadata);
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this.referencesIO = new DatabaseReferencesIO(fileIO, referencesMetadata);
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}
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@Override
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@ -52,7 +41,6 @@ public class DatabaseCore implements IDatabase {
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throw new IOException("The database has been already closed!");
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}
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this.referencesMetadata.close();
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this.blocksMetadata.close();
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this.fileIO.close();
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this.closed = true;
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}
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@ -68,45 +56,35 @@ public class DatabaseCore implements IDatabase {
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this.close();
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}
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Path newDataFile = dataFile.resolveSibling("compressed-data-file.tmp");
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Path newBlocksFile = blocksMetaFile.resolveSibling("compressed-blocks-file.tmp");
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Path newReferencesFile = referencesMetaFile.resolveSibling("compressed-references-file.tmp");
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Path backupDataFile = dataFile.resolveSibling("backup-data.db.bak");
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Path backupBlocksFile = blocksMetaFile.resolveSibling("backup-blocks.dat.bak");
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Path backupReferencesFile = referencesMetaFile.resolveSibling("backup-references.dat.bak");
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Files.copy(dataFile, backupDataFile, StandardCopyOption.REPLACE_EXISTING, StandardCopyOption.COPY_ATTRIBUTES);
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Files.copy(blocksMetaFile, backupBlocksFile, StandardCopyOption.REPLACE_EXISTING, StandardCopyOption.COPY_ATTRIBUTES);
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Files.copy(referencesMetaFile, backupReferencesFile, StandardCopyOption.REPLACE_EXISTING, StandardCopyOption.COPY_ATTRIBUTES);
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Files.move(dataFile, newDataFile, StandardCopyOption.REPLACE_EXISTING);
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Files.move(blocksMetaFile, newBlocksFile, StandardCopyOption.REPLACE_EXISTING);
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Files.move(referencesMetaFile, newReferencesFile, StandardCopyOption.REPLACE_EXISTING);
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DatabaseCore databaseToClean = new DatabaseCore(newDataFile, newBlocksFile, newReferencesFile);
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DatabaseCore newDatabase = new DatabaseCore(dataFile, blocksMetaFile, referencesMetaFile);
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DatabaseCore databaseToClean = new DatabaseCore(newDataFile, newReferencesFile);
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DatabaseCore newDatabase = new DatabaseCore(dataFile, referencesMetaFile);
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long referencesCount = databaseToClean.referencesMetadata.getFirstFreeReference();
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long blocksCount = databaseToClean.blocksMetadata.getTotalBlocksCount();
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long writtenReferences = 0;
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long writtenBlocks = 0;
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for (int referenceID = 0; referenceID < referencesCount; referenceID++) {
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try {
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ReferenceInfo ref = databaseToClean.referencesMetadata.getCleanReference(referenceID);
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ReferenceInfo ref = databaseToClean.referencesMetadata.getReferenceInfo(referenceID);
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if (!NONEXISTENT_REFERENCE_INFO.equals(ref)) {
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ByteBuffer buffer = databaseToClean.referencesIO.readFromReference(referenceID);
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newDatabase.referencesIO.writeToReference(referenceID, ref.getCleanerId(), buffer.limit(), buffer);
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writtenReferences++;
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if (buffer.limit() > 0) {
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writtenBlocks++;
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}
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}
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} catch (IOException ex) {
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System.out.println("Error while reading reference " + referenceID + ". References written: " + writtenReferences);
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}
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}
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System.out.println("[Core Cleaner] References written: " + writtenReferences + ". Removed " + (blocksCount - writtenBlocks) + " blocks. Removed " + (referencesCount - writtenReferences) + " references.");
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System.out.println("[Core Cleaner] References written: " + writtenReferences + ". Removed " + (referencesCount - writtenReferences) + " references.");
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databaseToClean.close();
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newDatabase.close();
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Files.deleteIfExists(newDataFile);
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Files.deleteIfExists(newBlocksFile);
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Files.deleteIfExists(newReferencesFile);
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}
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}
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@ -6,13 +6,15 @@ import java.nio.ByteBuffer;
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import java.nio.channels.AsynchronousFileChannel;
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import java.nio.file.Path;
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import java.nio.file.StandardOpenOption;
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import java.util.concurrent.*;
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import java.util.concurrent.ExecutionException;
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import java.util.concurrent.atomic.AtomicLong;
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import java.util.concurrent.locks.ReentrantReadWriteLock;
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public class DatabaseFileIO implements IFileIO {
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private final AsynchronousFileChannel dataFileChannel;
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private final AtomicLong firstFreeIndex;
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private ReentrantReadWriteLock lock = new ReentrantReadWriteLock(false);
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private volatile boolean closed = false;
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public DatabaseFileIO(Path dataFile) throws IOException {
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@ -22,6 +24,8 @@ public class DatabaseFileIO implements IFileIO {
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@Override
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public ByteBuffer readAt(long index, int length) throws IOException {
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lock.readLock().lock();
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try {
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if (closed) throw new IOException("Database closed!");
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ByteBuffer dataBuffer = ByteBuffer.allocate(length);
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try {
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@ -33,15 +37,23 @@ public class DatabaseFileIO implements IFileIO {
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}
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dataBuffer.flip();
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return dataBuffer;
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} finally {
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lock.readLock().unlock();
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}
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}
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@Override
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public int writeAt(long index, int length, ByteBuffer data) throws IOException {
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if (closed) throw new IOException("Database closed!");
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lock.writeLock().lock();
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try {
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return writeAt_(index, length, data);
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} finally {
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lock.writeLock().unlock();
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}
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}
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private int writeAt_(long index, int length, ByteBuffer data) throws IOException {
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if (closed) throw new IOException("Database closed!");
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if (data.position() != 0) {
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throw new IOException("You didn't flip the ByteBuffer!");
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}
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@ -57,16 +69,26 @@ public class DatabaseFileIO implements IFileIO {
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@Override
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public long writeAtEnd(int length, ByteBuffer data) throws IOException {
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lock.writeLock().lock();
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try {
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if (closed) throw new IOException("Database closed!");
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long index = firstFreeIndex.getAndAdd(length);
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writeAt_(index, length, data);
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return index;
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} finally {
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lock.writeLock().unlock();
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}
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}
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@Override
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public void close() throws IOException {
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lock.writeLock().lock();
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try {
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if (closed) throw new IOException("Database already closed!");
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closed = true;
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dataFileChannel.close();
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} finally {
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lock.writeLock().unlock();
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}
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}
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}
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@ -1,53 +0,0 @@
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package it.cavallium.strangedb.database;
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import it.cavallium.strangedb.database.blocks.BlockInfo;
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import java.io.IOException;
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public interface IBlocksMetadata {
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long EMPTY_BLOCK_ID = -1;
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long ERROR_BLOCK_ID = -2;
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BlockInfo EMPTY_BLOCK_INFO = new BlockInfo(0, 0);
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/**
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* Get block info
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* @param blockId block id
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* @return block metadata
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*/
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BlockInfo getBlockInfo(long blockId) throws IOException;
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/**
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* New empty block info
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* @return block id
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*/
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default long newBlock() {
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return EMPTY_BLOCK_ID;
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}
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/**
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* Set block info
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* @param index block index
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* @param size block size
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* @return block id
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*/
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long newBlock(long index, int size) throws IOException;
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/**
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* Set block info
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* @param blockInfo block info
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* @return block id
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*/
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default long newBlock(BlockInfo blockInfo) throws IOException {
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return this.newBlock(blockInfo.getIndex(), blockInfo.getSize());
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}
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/**
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* Close file
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*/
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void close() throws IOException;
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/**
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* Get total count of blocks
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* @return
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*/
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long getTotalBlocksCount();
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}
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@ -4,7 +4,7 @@ import java.io.IOException;
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public interface IDatabase {
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int DISK_BLOCK_SIZE = 4096;
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int DISK_BLOCK_SIZE = 2*4096;
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void close() throws IOException;
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@ -5,35 +5,30 @@ import it.cavallium.strangedb.database.references.ReferenceInfo;
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import java.io.IOException;
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public interface IReferencesMetadata {
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/**
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* Get block of reference
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* @param reference reference
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* @return block id
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*/
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long getReferenceBlockId(long reference) throws IOException;
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/**
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* Get reference info
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* @param reference reference
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* @return reference info
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* @throws IOException
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*/
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ReferenceInfo getCleanReference(long reference) throws IOException;
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ReferenceInfo getReferenceInfo(long reference) throws IOException;
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/**
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* Allocate a block for a new reference
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* Allocate a new reference
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*
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* @param blockId block id
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* @param index index
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* @param size size
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* @return reference
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*/
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long newReference(long blockId) throws IOException;
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long newReference(long index, int size) throws IOException;
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/**
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* Change reference
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* @param reference reference
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* @param cleanerId cleaner id
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* @param blockId block id
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* @param info info
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*/
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void editReference(long reference, byte cleanerId, long blockId) throws IOException;
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void editReference(long reference, ReferenceInfo info) throws IOException;
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/**
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* Delete reference
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@ -1,44 +0,0 @@
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package it.cavallium.strangedb.database.blocks;
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import java.util.Objects;
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import java.util.StringJoiner;
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public class BlockInfo {
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private final long index;
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private final int size;
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public BlockInfo(long index, int size) {
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this.index = index;
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this.size = size;
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}
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public long getIndex() {
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return index;
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}
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public int getSize() {
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return size;
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}
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@Override
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public boolean equals(Object o) {
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if (this == o) return true;
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if (o == null || getClass() != o.getClass()) return false;
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BlockInfo blockInfo = (BlockInfo) o;
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return index == blockInfo.index &&
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size == blockInfo.size;
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}
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@Override
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public int hashCode() {
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return Objects.hash(index, size);
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}
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@Override
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public String toString() {
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return new StringJoiner(", ", BlockInfo.class.getSimpleName() + "[", "]")
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.add("index=" + index)
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.add("size=" + size)
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.toString();
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}
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}
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@ -1,80 +0,0 @@
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package it.cavallium.strangedb.database.blocks;
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import it.cavallium.strangedb.database.DatabaseFileIO;
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import it.cavallium.strangedb.database.IBlocksIO;
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import it.cavallium.strangedb.database.IBlocksMetadata;
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import java.io.IOException;
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import java.nio.ByteBuffer;
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import java.util.concurrent.CompletionException;
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import java.util.concurrent.ExecutionException;
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import java.util.concurrent.Future;
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import java.util.concurrent.locks.ReentrantLock;
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import java.util.concurrent.locks.ReentrantReadWriteLock;
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import static it.cavallium.strangedb.database.IBlocksMetadata.EMPTY_BLOCK_ID;
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import static it.cavallium.strangedb.database.IBlocksMetadata.ERROR_BLOCK_ID;
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public class DatabaseBlocksIO implements IBlocksIO {
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private final DatabaseFileIO fileIO;
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private final IBlocksMetadata blocksMetadata;
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public DatabaseBlocksIO(DatabaseFileIO fileIO, IBlocksMetadata blocksMetadata) {
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this.fileIO = fileIO;
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this.blocksMetadata = blocksMetadata;
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}
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@Override
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public long newBlock(int size, ByteBuffer data) throws IOException {
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if (size == 0) {
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return EMPTY_BLOCK_ID;
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}
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if (size < 0) {
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throw new IOException("Trying to create a block with size " + size);
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}
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if (data.limit() < size) {
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throw new IOException("Trying to create a block with size " + size + " but with a buffer of size " + data.limit());
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}
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long index = fileIO.writeAtEnd(size, data);
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return blocksMetadata.newBlock(index, size);
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}
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@Override
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public ByteBuffer readBlock(long blockId) throws IOException {
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if (blockId == EMPTY_BLOCK_ID) {
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return ByteBuffer.wrap(new byte[0]);
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}
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if (blockId == ERROR_BLOCK_ID) {
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throw new IOException("Errored block id");
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}
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if (blockId < 0) {
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throw new IOException("Block id " + blockId + " is not valid");
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}
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BlockInfo blockInfo = blocksMetadata.getBlockInfo(blockId);
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return fileIO.readAt(blockInfo.getIndex(), blockInfo.getSize());
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}
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public ByteBuffer readBlockSizeAndLastElementOfReferencesList(long blockId) throws IOException {
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if (blockId == EMPTY_BLOCK_ID) {
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return ByteBuffer.wrap(new byte[0]);
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}
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if (blockId == ERROR_BLOCK_ID) {
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throw new IOException("Errored block id");
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}
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if (blockId < 0) {
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throw new IOException("Block id " + blockId + " is not valid");
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}
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BlockInfo blockInfo = blocksMetadata.getBlockInfo(blockId);
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if (blockInfo.getSize() >= Integer.BYTES * 2 + Long.BYTES) {
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return fileIO.readAt(blockInfo.getIndex() + blockInfo.getSize() - (Integer.BYTES + Long.BYTES), Integer.BYTES + Long.BYTES);
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} else {
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return fileIO.readAt(blockInfo.getIndex(), blockInfo.getSize());
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}
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}
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@Override
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public void close() {
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}
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}
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@ -1,128 +0,0 @@
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package it.cavallium.strangedb.database.blocks;
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import it.cavallium.strangedb.database.IBlocksMetadata;
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import java.io.IOException;
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import java.nio.ByteBuffer;
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import java.nio.channels.AsynchronousFileChannel;
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import java.nio.file.Path;
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import java.nio.file.StandardOpenOption;
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import java.util.concurrent.ExecutionException;
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import java.util.concurrent.atomic.AtomicLong;
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import static it.cavallium.strangedb.database.IDatabase.DISK_BLOCK_SIZE;
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public class DatabaseBlocksMetadata implements IBlocksMetadata {
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public static final BlockInfo ERROR_BLOCK_INFO = new BlockInfo(-2, 0);
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private static final int BLOCK_META_BYTES_COUNT = Long.BYTES + Integer.BYTES;
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public static final int BLOCK_META_READS_AT_EVERY_READ = (DISK_BLOCK_SIZE - DISK_BLOCK_SIZE % BLOCK_META_BYTES_COUNT) / BLOCK_META_BYTES_COUNT;
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private final AsynchronousFileChannel metaFileChannel;
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private final DatabaseBlocksMetadataCache cache;
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private AtomicLong firstFreeBlock;
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public DatabaseBlocksMetadata(Path metaFile) throws IOException {
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metaFileChannel = AsynchronousFileChannel.open(metaFile, StandardOpenOption.READ, StandardOpenOption.WRITE);
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firstFreeBlock = new AtomicLong(metaFileChannel.size() / BLOCK_META_BYTES_COUNT);
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this.cache = new DatabaseBlocksMetadataCache(this::writeBlockToDisk);
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}
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@Override
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public BlockInfo getBlockInfo(long blockId) throws IOException {
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if (blockId == EMPTY_BLOCK_ID) {
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return EMPTY_BLOCK_INFO;
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}
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if (blockId == ERROR_BLOCK_ID) {
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throw new IOException("Errored block id");
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}
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BlockInfo blockInfo;
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if ((blockInfo = cache.get(blockId)) != ERROR_BLOCK_INFO) {
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return blockInfo;
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}
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long position = blockId * BLOCK_META_BYTES_COUNT;
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int size = BLOCK_META_READS_AT_EVERY_READ * BLOCK_META_BYTES_COUNT;
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long currentFirstFreeBlock = this.firstFreeBlock.get();
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if (blockId > currentFirstFreeBlock) {
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return EMPTY_BLOCK_INFO;
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}
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if (blockId + (size - 1) / BLOCK_META_BYTES_COUNT >= currentFirstFreeBlock) {
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size = (int) ((currentFirstFreeBlock - blockId) * BLOCK_META_BYTES_COUNT);
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}
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int blocksCount = size / BLOCK_META_BYTES_COUNT;
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ByteBuffer buffer = ByteBuffer.allocate(size);
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try {
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metaFileChannel.read(buffer, position).get();
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} catch (InterruptedException e) {
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throw new IOException(e);
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} catch (ExecutionException e) {
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throw new IOException(e.getCause());
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}
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buffer.flip();
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|
||||
if (blocksCount < 1) {
|
||||
throw new IOException("Trying to read <1 blocks");
|
||||
}
|
||||
if (buffer.limit() % BLOCK_META_BYTES_COUNT != 0 || buffer.limit() < BLOCK_META_BYTES_COUNT) {
|
||||
throw new IOException("The buffer is smaller than the data requested.");
|
||||
} else if (buffer.limit() != size) {
|
||||
size = buffer.limit();
|
||||
blocksCount = size / BLOCK_META_BYTES_COUNT;
|
||||
}
|
||||
|
||||
long[] allBlockIds = new long[blocksCount];
|
||||
BlockInfo[] allBlockInfo = new BlockInfo[blocksCount];
|
||||
|
||||
blockInfo = EMPTY_BLOCK_INFO;
|
||||
for (int delta = 0; delta < blocksCount; delta++) {
|
||||
long blockToLoad = blockId + delta;
|
||||
long blockIndex = buffer.getLong();
|
||||
int blockSize = buffer.getInt();
|
||||
BlockInfo currentBlockInfo = new BlockInfo(blockIndex, blockSize);
|
||||
allBlockIds[delta] = blockToLoad;
|
||||
allBlockInfo[delta] = currentBlockInfo;
|
||||
if (blockToLoad == blockId) {
|
||||
blockInfo = currentBlockInfo;
|
||||
}
|
||||
}
|
||||
cache.putAll(allBlockIds, allBlockInfo);
|
||||
return blockInfo;
|
||||
}
|
||||
|
||||
@Override
|
||||
public long newBlock(long index, int size) throws IOException {
|
||||
if (size == 0) {
|
||||
return EMPTY_BLOCK_ID;
|
||||
}
|
||||
long newBlockId = firstFreeBlock.getAndIncrement();
|
||||
BlockInfo blockInfo = new BlockInfo(index, size);
|
||||
cache.put(newBlockId, blockInfo);
|
||||
return newBlockId;
|
||||
}
|
||||
|
||||
@Override
|
||||
public void close() throws IOException {
|
||||
cache.close();
|
||||
metaFileChannel.close();
|
||||
}
|
||||
|
||||
private void writeBlockToDisk(long blockId, long index, int size) throws IOException {
|
||||
ByteBuffer data = ByteBuffer.allocate(BLOCK_META_BYTES_COUNT);
|
||||
data.putLong(index);
|
||||
data.putInt(size);
|
||||
data.flip();
|
||||
try {
|
||||
metaFileChannel.write(data, blockId * BLOCK_META_BYTES_COUNT).get();
|
||||
} catch (InterruptedException e) {
|
||||
throw new IOException(e);
|
||||
} catch (ExecutionException e) {
|
||||
throw new IOException(e.getCause());
|
||||
}
|
||||
}
|
||||
|
||||
@Override
|
||||
public long getTotalBlocksCount() {
|
||||
return firstFreeBlock.get();
|
||||
}
|
||||
}
|
@ -1,143 +0,0 @@
|
||||
package it.cavallium.strangedb.database.blocks;
|
||||
|
||||
import it.unimi.dsi.fastutil.longs.*;
|
||||
import it.unimi.dsi.fastutil.objects.ObjectArrayList;
|
||||
import it.unimi.dsi.fastutil.objects.ObjectIterator;
|
||||
|
||||
import java.io.IOException;
|
||||
import java.util.ArrayList;
|
||||
import java.util.Collection;
|
||||
import java.util.LinkedList;
|
||||
import java.util.List;
|
||||
import java.util.concurrent.*;
|
||||
import java.util.concurrent.locks.ReentrantReadWriteLock;
|
||||
|
||||
import static it.cavallium.strangedb.database.blocks.DatabaseBlocksMetadata.BLOCK_META_READS_AT_EVERY_READ;
|
||||
|
||||
public class DatabaseBlocksMetadataCache {
|
||||
|
||||
private static final int BASE_QUANTITY = (BLOCK_META_READS_AT_EVERY_READ < 500 ? BLOCK_META_READS_AT_EVERY_READ : 500);
|
||||
private static final int GOOD_CACHE_SIZE = 140 * BASE_QUANTITY;
|
||||
private static final int FLUSH_CACHE_SIZE = 300 * BLOCK_META_READS_AT_EVERY_READ;
|
||||
private static final int MAX_CACHE_SIZE = 400 * BLOCK_META_READS_AT_EVERY_READ;
|
||||
|
||||
private final Long2ObjectMap<BlockInfo> blocks2Info = Long2ObjectMaps.synchronize(new Long2ObjectLinkedOpenHashMap<>(MAX_CACHE_SIZE, 0.5f));
|
||||
|
||||
private final ReentrantReadWriteLock lock = new ReentrantReadWriteLock(false);
|
||||
private final DatabaseBlocksMetadataCacheFlusher flusher;
|
||||
private volatile boolean closed;
|
||||
ExecutorService flushExecutorService = Executors.newFixedThreadPool(ForkJoinPool.getCommonPoolParallelism(), (r) -> new Thread(r, "Blocks Flush Thread"));
|
||||
|
||||
public DatabaseBlocksMetadataCache(DatabaseBlocksMetadataCacheFlusher flusher) {
|
||||
this.flusher = flusher;
|
||||
}
|
||||
|
||||
public BlockInfo get(long block) throws IOException {
|
||||
if (closed) throw new IOException("Cache already closed!");
|
||||
lock.readLock().lock();
|
||||
try {
|
||||
return blocks2Info.getOrDefault(block, DatabaseBlocksMetadata.ERROR_BLOCK_INFO);
|
||||
} finally {
|
||||
lock.readLock().unlock();
|
||||
}
|
||||
}
|
||||
|
||||
public void put(long block, BlockInfo blockInfo) throws IOException {
|
||||
if (closed) return;
|
||||
lock.writeLock().lock();
|
||||
try {
|
||||
blocks2Info.put(block, blockInfo);
|
||||
flush();
|
||||
} finally {
|
||||
lock.writeLock().unlock();
|
||||
}
|
||||
}
|
||||
|
||||
@SuppressWarnings("unchecked")
|
||||
public void putAll(long[] blocks, BlockInfo[] blockInfos) throws IOException {
|
||||
if (closed) return;
|
||||
lock.writeLock().lock();
|
||||
try {
|
||||
Long2ObjectMap blocksInfosToAdd = new Long2ObjectLinkedOpenHashMap<>(blocks, blockInfos, 0.5f);
|
||||
blocks2Info.putAll(blocksInfosToAdd);
|
||||
flush();
|
||||
} finally {
|
||||
lock.writeLock().unlock();
|
||||
}
|
||||
}
|
||||
|
||||
private void flush() throws IOException {
|
||||
if (closed) return;
|
||||
int blocks2InfoSize = blocks2Info.size();
|
||||
if (blocks2InfoSize >= FLUSH_CACHE_SIZE) {
|
||||
ObjectIterator<Long2ObjectMap.Entry<BlockInfo>> entriesIterator = blocks2Info.long2ObjectEntrySet().iterator();
|
||||
@SuppressWarnings("unchecked")
|
||||
ObjectArrayList<Callable<Void>> tasks = ObjectArrayList.wrap(new Callable[blocks2InfoSize - GOOD_CACHE_SIZE], blocks2InfoSize - GOOD_CACHE_SIZE);
|
||||
for (int i = 0; i < blocks2InfoSize - GOOD_CACHE_SIZE; i++) {
|
||||
Long2ObjectMap.Entry<BlockInfo> entry = entriesIterator.next();
|
||||
BlockInfo blockInfo = entry.getValue();
|
||||
long blockId = entry.getLongKey();
|
||||
long blockPosition = blockInfo.getIndex();
|
||||
int blockSize = blockInfo.getSize();
|
||||
entriesIterator.remove();
|
||||
|
||||
tasks.set(i, () -> {
|
||||
try {
|
||||
flusher.flush(blockId, blockPosition, blockSize);
|
||||
} catch (IOException e) {
|
||||
throw new CompletionException(e);
|
||||
}
|
||||
return null;
|
||||
});
|
||||
}
|
||||
try {
|
||||
flushExecutorService.invokeAll(tasks);
|
||||
} catch (InterruptedException e) {
|
||||
throw new IOException(e.getCause());
|
||||
}
|
||||
}
|
||||
}
|
||||
|
||||
public void close() throws IOException {
|
||||
if (!closed) {
|
||||
closed = true;
|
||||
lock.writeLock().lock();
|
||||
try {
|
||||
int blocks2InfoSize = blocks2Info.size();
|
||||
ObjectIterator<Long2ObjectMap.Entry<BlockInfo>> entriesIterator = blocks2Info.long2ObjectEntrySet().iterator();
|
||||
@SuppressWarnings("unchecked")
|
||||
ObjectArrayList<Callable<Void>> tasks = ObjectArrayList.wrap(new Callable[blocks2InfoSize], blocks2InfoSize);
|
||||
for (int i = 0; i < blocks2InfoSize; i++) {
|
||||
Long2ObjectMap.Entry<BlockInfo> entry = entriesIterator.next();
|
||||
BlockInfo blockInfo = entry.getValue();
|
||||
long blockId = entry.getLongKey();
|
||||
long blockPosition = blockInfo.getIndex();
|
||||
int blockSize = blockInfo.getSize();
|
||||
entriesIterator.remove();
|
||||
tasks.set(i, () -> {
|
||||
try {
|
||||
flusher.flush(blockId, blockPosition, blockSize);
|
||||
} catch (IOException e) {
|
||||
throw new CompletionException(e);
|
||||
}
|
||||
return null;
|
||||
});
|
||||
}
|
||||
try {
|
||||
flushExecutorService.invokeAll(tasks);
|
||||
} catch (InterruptedException e) {
|
||||
throw new IOException(e.getCause());
|
||||
}
|
||||
flushExecutorService.shutdown();
|
||||
try {
|
||||
if (!flushExecutorService.awaitTermination(Long.MAX_VALUE, TimeUnit.DAYS))
|
||||
flushExecutorService.shutdownNow();
|
||||
} catch (InterruptedException e) {
|
||||
throw new IOException(e);
|
||||
}
|
||||
} finally {
|
||||
lock.writeLock().unlock();
|
||||
}
|
||||
}
|
||||
}
|
||||
}
|
@ -1,8 +0,0 @@
|
||||
package it.cavallium.strangedb.database.blocks;
|
||||
|
||||
import java.io.IOException;
|
||||
import java.util.concurrent.Future;
|
||||
|
||||
public interface DatabaseBlocksMetadataCacheFlusher {
|
||||
void flush(long key, long value1, int value2) throws IOException;
|
||||
}
|
@ -1,67 +1,69 @@
|
||||
package it.cavallium.strangedb.database.references;
|
||||
|
||||
import it.cavallium.strangedb.database.DatabaseFileIO;
|
||||
import it.cavallium.strangedb.database.IReferencesIO;
|
||||
import it.cavallium.strangedb.database.blocks.DatabaseBlocksIO;
|
||||
|
||||
import java.io.IOException;
|
||||
import java.nio.ByteBuffer;
|
||||
import java.util.concurrent.locks.ReentrantReadWriteLock;
|
||||
|
||||
import static it.cavallium.strangedb.database.IBlocksMetadata.EMPTY_BLOCK_ID;
|
||||
|
||||
public class DatabaseReferencesIO implements IReferencesIO {
|
||||
|
||||
private final DatabaseBlocksIO blocksIO;
|
||||
private final DatabaseFileIO fileIO;
|
||||
private final DatabaseReferencesMetadata referencesMetadata;
|
||||
private ReentrantReadWriteLock lock = new ReentrantReadWriteLock(false);
|
||||
|
||||
public DatabaseReferencesIO(DatabaseBlocksIO blocksIO, DatabaseReferencesMetadata referencesMetadata) {
|
||||
this.blocksIO = blocksIO;
|
||||
public DatabaseReferencesIO(DatabaseFileIO fileIO, DatabaseReferencesMetadata referencesMetadata) {
|
||||
this.fileIO = fileIO;
|
||||
this.referencesMetadata = referencesMetadata;
|
||||
}
|
||||
|
||||
@Override
|
||||
public long allocateReference() throws IOException {
|
||||
return referencesMetadata.newReference(EMPTY_BLOCK_ID);
|
||||
return referencesMetadata.newReference(0, 0);
|
||||
}
|
||||
|
||||
@Override
|
||||
public long allocateReference(int size, ByteBuffer data) throws IOException {
|
||||
long blockId = (size == 0) ? EMPTY_BLOCK_ID : blocksIO.newBlock(size, data);
|
||||
return referencesMetadata.newReference(blockId);
|
||||
long index = writeToFile(size, data);
|
||||
return referencesMetadata.newReference(index, size);
|
||||
}
|
||||
|
||||
@Override
|
||||
public void writeToReference(long reference, byte cleanerId, int size, ByteBuffer data) throws IOException {
|
||||
long blockId = (size == 0) ? EMPTY_BLOCK_ID : blocksIO.newBlock(size, data);
|
||||
lock.writeLock().lock();
|
||||
try {
|
||||
referencesMetadata.editReference(reference, cleanerId, blockId);
|
||||
} finally {
|
||||
lock.writeLock().unlock();
|
||||
}
|
||||
long index = writeToFile(size, data);
|
||||
referencesMetadata.editReference(reference, new ReferenceInfo(index, size, cleanerId));
|
||||
}
|
||||
|
||||
@Override
|
||||
public ByteBuffer readFromReference(long reference) throws IOException {
|
||||
long blockId;
|
||||
lock.readLock().lock();
|
||||
try {
|
||||
blockId = referencesMetadata.getReferenceBlockId(reference);
|
||||
} finally {
|
||||
lock.readLock().unlock();
|
||||
}
|
||||
return blocksIO.readBlock(blockId);
|
||||
ReferenceInfo referenceInfo = referencesMetadata.getReferenceInfo(reference);
|
||||
return fileIO.readAt(referenceInfo.getIndex(), referenceInfo.getSize());
|
||||
}
|
||||
|
||||
public ByteBuffer readFromReferenceSizeAndLastElementOfReferencesList(long reference) throws IOException {
|
||||
long blockId;
|
||||
lock.readLock().lock();
|
||||
try {
|
||||
blockId = referencesMetadata.getReferenceBlockId(reference);
|
||||
} finally {
|
||||
lock.readLock().unlock();
|
||||
ReferenceInfo referenceInfo = referencesMetadata.getReferenceInfo(reference);
|
||||
if (referenceInfo.getSize() >= Integer.BYTES * 2 + Long.BYTES) {
|
||||
return fileIO.readAt(referenceInfo.getIndex() + referenceInfo.getSize() - (Integer.BYTES + Long.BYTES), Integer.BYTES + Long.BYTES);
|
||||
} else {
|
||||
return fileIO.readAt(referenceInfo.getIndex(), referenceInfo.getSize());
|
||||
}
|
||||
return blocksIO.readBlockSizeAndLastElementOfReferencesList(blockId);
|
||||
}
|
||||
|
||||
/**
|
||||
*
|
||||
* @param size
|
||||
* @param data
|
||||
* @return index
|
||||
* @throws IOException
|
||||
*/
|
||||
private long writeToFile(int size, ByteBuffer data) throws IOException {
|
||||
if (size == 0 && data == null) return 0;
|
||||
if (size < 0) {
|
||||
throw new IOException("Trying to create a block with size " + size);
|
||||
}
|
||||
if (data.limit() < size) {
|
||||
throw new IOException("Trying to create a block with size " + size + " but with a buffer of size " + data.limit());
|
||||
}
|
||||
return fileIO.writeAtEnd(size, data);
|
||||
}
|
||||
}
|
||||
|
@ -7,61 +7,47 @@ import java.nio.ByteBuffer;
|
||||
import java.nio.channels.AsynchronousFileChannel;
|
||||
import java.nio.file.Path;
|
||||
import java.nio.file.StandardOpenOption;
|
||||
import java.util.concurrent.CompletableFuture;
|
||||
import java.util.concurrent.ExecutionException;
|
||||
import java.util.concurrent.Future;
|
||||
import java.util.concurrent.atomic.AtomicLong;
|
||||
import java.util.concurrent.locks.ReentrantReadWriteLock;
|
||||
|
||||
import static it.cavallium.strangedb.database.IBlocksMetadata.EMPTY_BLOCK_ID;
|
||||
import static it.cavallium.strangedb.database.IBlocksMetadata.ERROR_BLOCK_ID;
|
||||
import static it.cavallium.strangedb.database.IDatabase.DISK_BLOCK_SIZE;
|
||||
|
||||
public class DatabaseReferencesMetadata implements IReferencesMetadata {
|
||||
public static final byte ERRORED_CLEANER = (byte) -1;
|
||||
public static final byte BLANK_DATA_CLEANER = (byte) -2;
|
||||
public static final ReferenceInfo NONEXISTENT_REFERENCE_INFO = new ReferenceInfo(ERRORED_CLEANER, ERROR_BLOCK_ID);
|
||||
private static final int REF_META_BYTES_COUNT = Long.BYTES + Byte.BYTES;
|
||||
public static final ReferenceInfo NONEXISTENT_REFERENCE_INFO = new ReferenceInfo(-1, -1, ERRORED_CLEANER);
|
||||
private static final int REF_META_BYTES_COUNT = Long.BYTES + Integer.BYTES + Byte.BYTES;
|
||||
public static final int REF_META_READS_AT_EVERY_READ = (DISK_BLOCK_SIZE - DISK_BLOCK_SIZE % REF_META_BYTES_COUNT) / REF_META_BYTES_COUNT;
|
||||
|
||||
private final AsynchronousFileChannel metaFileChannel;
|
||||
private final DatabaseReferencesMetadataCache cache;
|
||||
private AtomicLong firstFreeReference;
|
||||
private AtomicLong lastWrittenReference;
|
||||
private final ReentrantReadWriteLock lock = new ReentrantReadWriteLock(false);
|
||||
|
||||
public DatabaseReferencesMetadata(Path refMetaFile) throws IOException {
|
||||
metaFileChannel = AsynchronousFileChannel.open(refMetaFile, StandardOpenOption.READ, StandardOpenOption.WRITE);
|
||||
firstFreeReference = new AtomicLong(metaFileChannel.size() / REF_META_BYTES_COUNT);
|
||||
lastWrittenReference = new AtomicLong(firstFreeReference.get() - 1);
|
||||
this.cache = new DatabaseReferencesMetadataCache(this::writeReferenceToDisk);
|
||||
this.cache = new DatabaseReferencesMetadataCache(new Flusher());
|
||||
}
|
||||
|
||||
@Override
|
||||
public long getReferenceBlockId(long reference) throws IOException {
|
||||
public ReferenceInfo getReferenceInfo(long reference) throws IOException {
|
||||
ReferenceInfo block;
|
||||
long[] allReferences;
|
||||
ReferenceInfo[] allInfo;
|
||||
lock.readLock().lock();
|
||||
try {
|
||||
return getReferenceBlockId_(reference);
|
||||
} finally {
|
||||
lock.readLock().unlock();
|
||||
}
|
||||
}
|
||||
|
||||
private long getReferenceBlockId_(long reference) throws IOException {
|
||||
long firstFreeReference = this.firstFreeReference.get();
|
||||
if (reference >= firstFreeReference) {
|
||||
return EMPTY_BLOCK_ID;
|
||||
return NONEXISTENT_REFERENCE_INFO;
|
||||
}
|
||||
long block;
|
||||
if ((block = cache.getBlock(reference)) != ERROR_BLOCK_ID) {
|
||||
if ((block = cache.getInfo(reference)) != NONEXISTENT_REFERENCE_INFO) {
|
||||
return block;
|
||||
}
|
||||
long position = reference * REF_META_BYTES_COUNT;
|
||||
int size = REF_META_READS_AT_EVERY_READ * REF_META_BYTES_COUNT;
|
||||
if (reference > firstFreeReference) {
|
||||
return EMPTY_BLOCK_ID;
|
||||
}
|
||||
if (reference + (size - 1) / REF_META_BYTES_COUNT >= firstFreeReference) {
|
||||
if (reference + (REF_META_READS_AT_EVERY_READ - 1) >= firstFreeReference) {
|
||||
size = (int) ((firstFreeReference - reference) * REF_META_BYTES_COUNT);
|
||||
}
|
||||
int referencesCount = size / REF_META_BYTES_COUNT;
|
||||
@ -86,72 +72,60 @@ public class DatabaseReferencesMetadata implements IReferencesMetadata {
|
||||
referencesCount = size / REF_META_BYTES_COUNT;
|
||||
}
|
||||
|
||||
long[] allReferences = new long[referencesCount];
|
||||
byte[] allCleaners = new byte[referencesCount];
|
||||
long[] allBlocks = new long[referencesCount];
|
||||
allReferences = new long[referencesCount];
|
||||
allInfo = new ReferenceInfo[referencesCount];
|
||||
|
||||
block = EMPTY_BLOCK_ID;
|
||||
block = NONEXISTENT_REFERENCE_INFO;
|
||||
for (int delta = 0; delta < referencesCount; delta++) {
|
||||
long referenceToLoad = reference + delta;
|
||||
long currentBlock = buffer.getLong();
|
||||
long currentIndex = buffer.getLong();
|
||||
int currentSize = buffer.getInt();
|
||||
byte cleanerId = buffer.get();
|
||||
if (buffer.limit() != 0 && currentBlock != 0xFFFFFFFFFFFFFFFFL) {
|
||||
ReferenceInfo refInfo = new ReferenceInfo(currentIndex, currentSize, cleanerId);
|
||||
if (buffer.limit() != 0 && currentIndex != 0xFFFFFFFFFFFFFFFFL) {
|
||||
allReferences[delta] = referenceToLoad;
|
||||
allCleaners[delta] = cleanerId;
|
||||
allBlocks[delta] = currentBlock;
|
||||
allInfo[delta] = refInfo;
|
||||
if (referenceToLoad == reference) {
|
||||
block = currentBlock;
|
||||
block = refInfo;
|
||||
}
|
||||
} else {
|
||||
allReferences[delta] = referenceToLoad;
|
||||
allCleaners[delta] = cleanerId;
|
||||
allBlocks[delta] = EMPTY_BLOCK_ID;
|
||||
allInfo[delta] = refInfo;
|
||||
if (referenceToLoad == reference) {
|
||||
block = EMPTY_BLOCK_ID;
|
||||
block = NONEXISTENT_REFERENCE_INFO;
|
||||
}
|
||||
}
|
||||
}
|
||||
cache.putAll(allReferences, allCleaners, allBlocks);
|
||||
return block;
|
||||
}
|
||||
|
||||
/**
|
||||
* This method is <b>SLOW</b>! Use this only for the cleaner
|
||||
*
|
||||
* @param reference reference
|
||||
* @return
|
||||
* @throws IOException
|
||||
*/
|
||||
@Deprecated
|
||||
@Override
|
||||
public ReferenceInfo getCleanReference(long reference) throws IOException {
|
||||
lock.readLock().lock();
|
||||
try {
|
||||
getReferenceBlockId_(reference);
|
||||
return cache.get(reference);
|
||||
} finally {
|
||||
lock.readLock().unlock();
|
||||
}
|
||||
lock.writeLock().lock();
|
||||
try {
|
||||
cache.putAll(allReferences, allInfo);
|
||||
} finally {
|
||||
lock.writeLock().unlock();
|
||||
}
|
||||
return block;
|
||||
}
|
||||
|
||||
@Override
|
||||
public long newReference(long blockId) throws IOException {
|
||||
public long newReference(long index, int size) throws IOException {
|
||||
lock.writeLock().lock();
|
||||
long newReference;
|
||||
try {
|
||||
newReference = firstFreeReference.getAndIncrement();
|
||||
cache.put(newReference, new ReferenceInfo(index, size, BLANK_DATA_CLEANER), true);
|
||||
} finally {
|
||||
lock.writeLock().unlock();
|
||||
}
|
||||
cache.put(newReference, BLANK_DATA_CLEANER, blockId);
|
||||
return newReference;
|
||||
}
|
||||
|
||||
@Override
|
||||
public void editReference(long reference, byte cleanerId, long blockId) throws IOException {
|
||||
public void editReference(long reference, ReferenceInfo info) throws IOException {
|
||||
lock.writeLock().lock();
|
||||
try {
|
||||
cache.put(reference, cleanerId, blockId);
|
||||
cache.put(reference, info, true);
|
||||
} finally {
|
||||
lock.writeLock().unlock();
|
||||
}
|
||||
@ -161,7 +135,7 @@ public class DatabaseReferencesMetadata implements IReferencesMetadata {
|
||||
public void deleteReference(long reference) throws IOException {
|
||||
lock.writeLock().lock();
|
||||
try {
|
||||
cache.put(reference, NONEXISTENT_REFERENCE_INFO.getCleanerId(), NONEXISTENT_REFERENCE_INFO.getBlockId());
|
||||
cache.put(reference, NONEXISTENT_REFERENCE_INFO, true);
|
||||
} finally {
|
||||
lock.writeLock().unlock();
|
||||
}
|
||||
@ -188,13 +162,20 @@ public class DatabaseReferencesMetadata implements IReferencesMetadata {
|
||||
}
|
||||
}
|
||||
|
||||
private void writeReferenceToDisk(long reference, byte cleanerId, long blockId) throws IOException {
|
||||
if (cleanerId == ERRORED_CLEANER) {
|
||||
private class Flusher implements DatabaseReferencesMetadataCacheFlusher {
|
||||
private Flusher() {
|
||||
|
||||
}
|
||||
|
||||
@Override
|
||||
public void flush(long reference, ReferenceInfo info, boolean closing) throws IOException {
|
||||
if (info.getCleanerId() == ERRORED_CLEANER) {
|
||||
throw new IOException("Passing a cleaner with the id of ERRORED_CLIENT");
|
||||
}
|
||||
ByteBuffer data = ByteBuffer.allocate(REF_META_BYTES_COUNT);
|
||||
data.putLong(blockId);
|
||||
data.put(cleanerId);
|
||||
data.putLong(info.getIndex());
|
||||
data.putInt(info.getSize());
|
||||
data.put(info.getCleanerId());
|
||||
data.flip();
|
||||
try {
|
||||
metaFileChannel.write(data, reference * REF_META_BYTES_COUNT).get();
|
||||
@ -205,6 +186,28 @@ public class DatabaseReferencesMetadata implements IReferencesMetadata {
|
||||
}
|
||||
}
|
||||
|
||||
@Override
|
||||
public void flushMultiple(long referenceStart, ReferenceInfo[] infos) throws IOException {
|
||||
ByteBuffer data = ByteBuffer.allocate(infos.length * REF_META_BYTES_COUNT);
|
||||
for (ReferenceInfo info : infos) {
|
||||
if (info.getCleanerId() == ERRORED_CLEANER) {
|
||||
throw new IOException("Passing a cleaner with the id of ERRORED_CLIENT");
|
||||
}
|
||||
data.putLong(info.getIndex());
|
||||
data.putInt(info.getSize());
|
||||
data.put(info.getCleanerId());
|
||||
}
|
||||
data.flip();
|
||||
try {
|
||||
metaFileChannel.write(data, referenceStart * REF_META_BYTES_COUNT).get();
|
||||
} catch (InterruptedException e) {
|
||||
throw new IOException(e);
|
||||
} catch (ExecutionException e) {
|
||||
throw new IOException(e.getCause());
|
||||
}
|
||||
}
|
||||
}
|
||||
|
||||
/*
|
||||
private void writeReferenceToDisk(long reference, byte cleanerId, long blockId) throws IOException {
|
||||
if (cleanerId == ERRORED_CLEANER) {
|
||||
|
@ -1,21 +1,16 @@
|
||||
package it.cavallium.strangedb.database.references;
|
||||
|
||||
import it.cavallium.strangedb.VariableWrapper;
|
||||
import it.unimi.dsi.fastutil.longs.*;
|
||||
import it.unimi.dsi.fastutil.objects.ObjectArrayList;
|
||||
import it.unimi.dsi.fastutil.objects.ObjectIterator;
|
||||
import it.unimi.dsi.fastutil.objects.ObjectIterators;
|
||||
|
||||
import java.io.IOException;
|
||||
import java.util.ArrayList;
|
||||
import java.util.Collection;
|
||||
import java.util.HashSet;
|
||||
import java.util.LinkedList;
|
||||
import java.util.List;
|
||||
import java.util.concurrent.*;
|
||||
import java.util.concurrent.locks.ReentrantReadWriteLock;
|
||||
|
||||
import static it.cavallium.strangedb.database.IBlocksMetadata.ERROR_BLOCK_ID;
|
||||
import static it.cavallium.strangedb.database.blocks.DatabaseBlocksMetadata.BLOCK_META_READS_AT_EVERY_READ;
|
||||
import static it.cavallium.strangedb.database.references.DatabaseReferencesMetadata.NONEXISTENT_REFERENCE_INFO;
|
||||
import static it.cavallium.strangedb.database.references.DatabaseReferencesMetadata.REF_META_READS_AT_EVERY_READ;
|
||||
|
||||
@ -23,11 +18,13 @@ public class DatabaseReferencesMetadataCache {
|
||||
|
||||
private static final int BASE_QUANTITY = (REF_META_READS_AT_EVERY_READ < 500 ? REF_META_READS_AT_EVERY_READ : 500);
|
||||
private static final int GOOD_CACHE_SIZE = 140 * BASE_QUANTITY;
|
||||
private static final int FLUSH_CACHE_SIZE = 300 * BLOCK_META_READS_AT_EVERY_READ;
|
||||
private static final int FLUSH_CACHE_SIZE = 300 * BASE_QUANTITY;
|
||||
private static final int MAX_CACHE_SIZE = 400 * BASE_QUANTITY;
|
||||
private static final int MODIFIED_FLUSH_CACHE_SIZE = 160 * BASE_QUANTITY;
|
||||
private static final int MODIFIED_MAX_CACHE_SIZE = 260 * BASE_QUANTITY;
|
||||
|
||||
private final Long2LongMap references2Blocks = Long2LongMaps.synchronize(new Long2LongLinkedOpenHashMap(MAX_CACHE_SIZE, 0.5f));
|
||||
private final Long2ByteMap referencesCleaners = Long2ByteMaps.synchronize(new Long2ByteLinkedOpenHashMap(MAX_CACHE_SIZE, 0.5f));
|
||||
private final Long2ObjectMap<ReferenceInfo> referencesInfos = Long2ObjectMaps.synchronize(new Long2ObjectLinkedOpenHashMap<>(MAX_CACHE_SIZE, 0.5f));
|
||||
private final Long2ObjectMap<ReferenceInfo> modifiedInfos = Long2ObjectMaps.synchronize(new Long2ObjectLinkedOpenHashMap<>(MODIFIED_MAX_CACHE_SIZE, 0.5f));
|
||||
private final ReentrantReadWriteLock lock = new ReentrantReadWriteLock(false);
|
||||
private final DatabaseReferencesMetadataCacheFlusher flusher;
|
||||
private volatile boolean closed;
|
||||
@ -37,60 +34,50 @@ public class DatabaseReferencesMetadataCache {
|
||||
this.flusher = flusher;
|
||||
}
|
||||
|
||||
public long getBlock(long reference) throws IOException {
|
||||
public ReferenceInfo getInfo(long reference) throws IOException {
|
||||
if (closed) throw new IOException("Cache already closed!");
|
||||
lock.readLock().lock();
|
||||
try {
|
||||
return references2Blocks.getOrDefault(reference, ERROR_BLOCK_ID);
|
||||
return referencesInfos.getOrDefault(reference, NONEXISTENT_REFERENCE_INFO);
|
||||
} finally {
|
||||
lock.readLock().unlock();
|
||||
}
|
||||
}
|
||||
|
||||
public ReferenceInfo get(long reference) throws IOException {
|
||||
if (closed) throw new IOException("Cache already closed!");
|
||||
lock.readLock().lock();
|
||||
try {
|
||||
long blockId = references2Blocks.getOrDefault(reference, ERROR_BLOCK_ID);
|
||||
if (blockId == ERROR_BLOCK_ID) {
|
||||
return NONEXISTENT_REFERENCE_INFO;
|
||||
}
|
||||
byte cleanerId = referencesCleaners.get(reference);
|
||||
return new ReferenceInfo(cleanerId, blockId);
|
||||
} finally {
|
||||
lock.readLock().unlock();
|
||||
}
|
||||
}
|
||||
|
||||
public void put(long reference, byte cleanerId, long blockId) throws IOException {
|
||||
public void put(long reference, ReferenceInfo info, boolean modified) throws IOException {
|
||||
if (closed) throw new IOException("Cache already closed!");
|
||||
lock.writeLock().lock();
|
||||
try {
|
||||
if (cleanerId == 0) {
|
||||
if (info.getCleanerId() == 0) {
|
||||
throw new IOException("Null cleaner id");
|
||||
}
|
||||
references2Blocks.put(reference, blockId);
|
||||
referencesCleaners.put(reference, cleanerId);
|
||||
referencesInfos.put(reference, info);
|
||||
if (modified) {
|
||||
modifiedInfos.put(reference, info);
|
||||
}
|
||||
flush();
|
||||
} finally {
|
||||
lock.writeLock().unlock();
|
||||
}
|
||||
}
|
||||
|
||||
public void putAll(long[] references, byte[] cleanerIds, long[] blockIds) throws IOException {
|
||||
/**
|
||||
* Put all items in cache
|
||||
* @param references
|
||||
* @param infos
|
||||
* @throws IOException
|
||||
*/
|
||||
public void putAll(long[] references, ReferenceInfo[] infos) throws IOException {
|
||||
if (closed) throw new IOException("Cache already closed!");
|
||||
lock.writeLock().lock();
|
||||
try {
|
||||
Long2LongMap referencesBlocksToAdd = new Long2LongLinkedOpenHashMap(references, blockIds, 0.5f);
|
||||
Long2ByteMap referencesCleanersToAdd = new Long2ByteLinkedOpenHashMap(references, cleanerIds, 0.5f);
|
||||
Long2ObjectMap<ReferenceInfo> referencesBlocksToAdd = new Long2ObjectLinkedOpenHashMap<>(references.length, 0.5f);
|
||||
for (int i = 0; i < references.length; i++) {
|
||||
if (cleanerIds[i] == 0) {
|
||||
referencesBlocksToAdd.remove(references[i]);
|
||||
referencesCleanersToAdd.remove(references[i]);
|
||||
if (infos[i].getCleanerId() != 0) {
|
||||
referencesBlocksToAdd.put(references[i], infos[i]);
|
||||
}
|
||||
}
|
||||
references2Blocks.putAll(referencesBlocksToAdd);
|
||||
referencesCleaners.putAll(referencesCleanersToAdd);
|
||||
referencesInfos.putAll(referencesBlocksToAdd);
|
||||
flush();
|
||||
} finally {
|
||||
lock.writeLock().unlock();
|
||||
@ -99,35 +86,53 @@ public class DatabaseReferencesMetadataCache {
|
||||
|
||||
private void flush() throws IOException {
|
||||
if (closed) return;
|
||||
int references2BlocksSize = references2Blocks.size();
|
||||
if (references2BlocksSize >= FLUSH_CACHE_SIZE) {
|
||||
ObjectIterator<Long2LongMap.Entry> entriesIterator = references2Blocks.long2LongEntrySet().iterator();
|
||||
ObjectIterator<Long2ByteMap.Entry> cleanersIterator = referencesCleaners.long2ByteEntrySet().iterator();
|
||||
@SuppressWarnings("unchecked")
|
||||
ObjectArrayList<Callable<Void>> tasks = ObjectArrayList.wrap(new Callable[references2BlocksSize - GOOD_CACHE_SIZE], references2BlocksSize - GOOD_CACHE_SIZE);
|
||||
for (int i = 0; i < references2BlocksSize - GOOD_CACHE_SIZE; i++) {
|
||||
Long2LongMap.Entry entry = entriesIterator.next();
|
||||
Long2ByteMap.Entry cleaner = cleanersIterator.next();
|
||||
long refId = entry.getLongKey();
|
||||
byte cleanerId = cleaner.getByteValue();
|
||||
long blockId = entry.getLongValue();
|
||||
entriesIterator.remove();
|
||||
cleanersIterator.remove();
|
||||
int readOnlyInfoSize = referencesInfos.size();
|
||||
int modifiedInfoSize = modifiedInfos.size();
|
||||
if (readOnlyInfoSize >= FLUSH_CACHE_SIZE || modifiedInfoSize >= MODIFIED_FLUSH_CACHE_SIZE) {
|
||||
ObjectIterator<Long2ObjectMap.Entry<ReferenceInfo>> entriesIterator = modifiedInfos.long2ObjectEntrySet().iterator();
|
||||
long startId = -1;
|
||||
long prevId = -1;
|
||||
LinkedList<ReferenceInfo> prevInfos = new LinkedList<>();
|
||||
for (int i = 0; i < modifiedInfoSize; i++) {
|
||||
Long2ObjectMap.Entry<ReferenceInfo> entry = entriesIterator.next();
|
||||
Long refId = entry.getLongKey();
|
||||
ReferenceInfo info = entry.getValue();
|
||||
|
||||
tasks.set(i, () -> {
|
||||
try {
|
||||
flusher.flush(refId, cleanerId, blockId);
|
||||
} catch (IOException e) {
|
||||
throw new CompletionException(e);
|
||||
if (info == null) {
|
||||
throw new IOException("A reference is null");
|
||||
}
|
||||
return null;
|
||||
});
|
||||
|
||||
if (startId == -1) {
|
||||
startId = refId;
|
||||
prevInfos.add(info);
|
||||
} else if (prevId + 1 == refId) {
|
||||
prevInfos.add(info);
|
||||
} else {
|
||||
flushAction(prevInfos, startId);
|
||||
|
||||
startId = refId;
|
||||
prevInfos.clear();
|
||||
prevInfos.add(info);
|
||||
}
|
||||
try {
|
||||
flushExecutorService.invokeAll(tasks);
|
||||
} catch (InterruptedException e) {
|
||||
throw new IOException(e.getCause());
|
||||
prevId = refId;
|
||||
}
|
||||
modifiedInfos.clear();
|
||||
flushAction(prevInfos, startId);
|
||||
}
|
||||
if (readOnlyInfoSize >= FLUSH_CACHE_SIZE) {
|
||||
ObjectIterator<Long2ObjectMap.Entry<ReferenceInfo>> entriesIterator = referencesInfos.long2ObjectEntrySet().iterator();
|
||||
for (int i = 0; i < readOnlyInfoSize - GOOD_CACHE_SIZE; i++) {
|
||||
entriesIterator.next();
|
||||
entriesIterator.remove();
|
||||
}
|
||||
}
|
||||
}
|
||||
|
||||
private void flushAction(LinkedList<ReferenceInfo> prevInfos, long startId) throws IOException {
|
||||
if (prevInfos.size() > 1) {
|
||||
flusher.flushMultiple(startId, prevInfos.toArray(new ReferenceInfo[0]));
|
||||
} else if (prevInfos.size() == 1) {
|
||||
flusher.flush(startId, prevInfos.getFirst(), false);
|
||||
}
|
||||
}
|
||||
|
||||
@ -136,28 +141,24 @@ public class DatabaseReferencesMetadataCache {
|
||||
closed = true;
|
||||
lock.writeLock().lock();
|
||||
try {
|
||||
int references2BlocksSize = references2Blocks.size();
|
||||
ObjectIterator<Long2LongMap.Entry> entriesIterator = references2Blocks.long2LongEntrySet().iterator();
|
||||
ObjectIterator<Long2ByteMap.Entry> cleanersIterator = referencesCleaners.long2ByteEntrySet().iterator();
|
||||
int references2BlocksSize = modifiedInfos.size();
|
||||
ObjectIterator<Long2ObjectMap.Entry<ReferenceInfo>> entriesIterator = modifiedInfos.long2ObjectEntrySet().iterator();
|
||||
@SuppressWarnings("unchecked")
|
||||
ObjectArrayList<Callable<Void>> tasks = ObjectArrayList.wrap(new Callable[references2BlocksSize], references2BlocksSize);
|
||||
for (int i = 0; i < references2BlocksSize; i++) {
|
||||
Long2LongMap.Entry entry = entriesIterator.next();
|
||||
Long2ByteMap.Entry cleaner = cleanersIterator.next();
|
||||
long refId = entry.getLongKey();
|
||||
byte cleanerId = cleaner.getByteValue();
|
||||
long blockId = entry.getLongValue();
|
||||
entriesIterator.remove();
|
||||
cleanersIterator.remove();
|
||||
Long2ObjectMap.Entry<ReferenceInfo> entry = entriesIterator.next();
|
||||
Long refId = entry.getLongKey();
|
||||
ReferenceInfo info = entry.getValue();
|
||||
tasks.set(i, () -> {
|
||||
try {
|
||||
flusher.flush(refId, cleanerId, blockId);
|
||||
flusher.flush(refId, info, true);
|
||||
} catch (IOException e) {
|
||||
throw new CompletionException(e);
|
||||
}
|
||||
return null;
|
||||
});
|
||||
}
|
||||
modifiedInfos.clear();
|
||||
try {
|
||||
flushExecutorService.invokeAll(tasks);
|
||||
} catch (InterruptedException e) {
|
||||
|
@ -1,8 +1,8 @@
|
||||
package it.cavallium.strangedb.database.references;
|
||||
|
||||
import java.io.IOException;
|
||||
import java.util.concurrent.Future;
|
||||
|
||||
public interface DatabaseReferencesMetadataCacheFlusher {
|
||||
void flush(long reference, byte cleanerId, long block) throws IOException;
|
||||
void flush(long reference, ReferenceInfo info, boolean closing) throws IOException;
|
||||
void flushMultiple(long referenceStart, ReferenceInfo[] info) throws IOException;
|
||||
}
|
||||
|
@ -4,41 +4,49 @@ import java.util.Objects;
|
||||
import java.util.StringJoiner;
|
||||
|
||||
public class ReferenceInfo {
|
||||
private final long index;
|
||||
private final int size;
|
||||
private final byte cleanerId;
|
||||
private final long blockId;
|
||||
|
||||
public ReferenceInfo(byte cleanerId, long blockId) {
|
||||
public ReferenceInfo(long index, int size, byte cleanerId) {
|
||||
this.index = index;
|
||||
this.size = size;
|
||||
this.cleanerId = cleanerId;
|
||||
this.blockId = blockId;
|
||||
}
|
||||
|
||||
public long getIndex() {
|
||||
return index;
|
||||
}
|
||||
|
||||
public int getSize() {
|
||||
return size;
|
||||
}
|
||||
|
||||
public byte getCleanerId() {
|
||||
return cleanerId;
|
||||
}
|
||||
|
||||
public long getBlockId() {
|
||||
return blockId;
|
||||
}
|
||||
|
||||
@Override
|
||||
public String toString() {
|
||||
return new StringJoiner(", ", ReferenceInfo.class.getSimpleName() + "[", "]")
|
||||
.add("cleanerId=" + cleanerId)
|
||||
.add("blockId=" + blockId)
|
||||
.toString();
|
||||
}
|
||||
|
||||
@Override
|
||||
public boolean equals(Object o) {
|
||||
if (this == o) return true;
|
||||
if (o == null || getClass() != o.getClass()) return false;
|
||||
ReferenceInfo that = (ReferenceInfo) o;
|
||||
return cleanerId == that.cleanerId &&
|
||||
blockId == that.blockId;
|
||||
return index == that.index &&
|
||||
size == that.size &&
|
||||
cleanerId == that.cleanerId;
|
||||
}
|
||||
|
||||
@Override
|
||||
public int hashCode() {
|
||||
return Objects.hash(cleanerId, blockId);
|
||||
return Objects.hash(index);
|
||||
}
|
||||
|
||||
@Override
|
||||
public String toString() {
|
||||
return new StringJoiner(", ", ReferenceInfo.class.getSimpleName() + "[", "]")
|
||||
.add("index=" + index)
|
||||
.add("size=" + size)
|
||||
.add("cleanerId=" + cleanerId)
|
||||
.toString();
|
||||
}
|
||||
}
|
||||
|
Loading…
Reference in New Issue
Block a user