Commit Graph

5744 Commits

Author SHA1 Message Date
Siying Dong
f9eb56791a db_bench: --dump_malloc_stats takes no effect
Summary:
Fix the bug that --dump_malloc_stats is set before opening the DB.
Closes https://github.com/facebook/rocksdb/pull/1447

Differential Revision: D4106001

Pulled By: siying

fbshipit-source-id: 4e746da
2016-10-31 14:54:26 -07:00
ananclub
6a4faee5cd fix freebsd build include path err and so & jar file name
Summary: Closes https://github.com/facebook/rocksdb/pull/1441

Differential Revision: D4103477

Pulled By: yiwu-arbug

fbshipit-source-id: 071a0dc
2016-10-31 09:39:16 -07:00
Siying Dong
c90c48d3c8 Show More DB Stats in info logs
Summary:
DB Stats now are truncated if there are too many CFs. Extend the buffer size to allow more to be printed out. Also, separate out malloc to another log line.
Closes https://github.com/facebook/rocksdb/pull/1439

Differential Revision: D4100943

Pulled By: yiwu-arbug

fbshipit-source-id: 79f7218
2016-10-29 16:09:18 -07:00
Siying Dong
1b295ac8ae DBTest.GetThreadStatus: Wait for test results for longer
Summary:
The current 10 millisecond waiting for test results may not be sufficient in some test environments. Increase it to 60 seconds and check the results for every 1 milliseond.

Already reviewed: https://reviews.facebook.net/D65457
Closes https://github.com/facebook/rocksdb/pull/1437

Differential Revision: D4099443

Pulled By: siying

fbshipit-source-id: cf1f205
2016-10-29 16:09:18 -07:00
Nipunn Koorapati
25f5742f0b Update documentation to point at gcc 4.8
Summary:
Rocksdb currently has many references to std::map.emplace_back()
which is not implemented in gcc 4.7, but valid in gcc 4.8. Confirmed that
it did not build with gcc 4.7, but builds fine with gcc 4.8
Closes https://github.com/facebook/rocksdb/pull/1272

Differential Revision: D4101385

Pulled By: IslamAbdelRahman

fbshipit-source-id: f6af453
2016-10-29 12:09:17 -07:00
Aaron Gao
b50a81a2bb Add a test for tailing_iterator
Summary:
A bug that tailingIterator->Seek(target) skips records.

I think the bug is in the SeekInternal starting at lines 387:
search_left_bound > search_right_bound
There are only 2 cases this can happen:
(1) target key is smaller than left most file
(2) target key is larger than right most file

The comment is wrong, there is another possibility that at the higher level there is a big gap such that the file in the lower level fits completely in the gap and then
indexer->GetNextLevelIndex returns search_left_bound > search_right_bound I think pointing on the files after and before the gap.
details: https://github.com/facebook/rocksdb/issues/1372

fixed this bug with test case added.
Closes https://github.com/facebook/rocksdb/pull/1436

Reviewed By: IslamAbdelRahman

Differential Revision: D4099313

Pulled By: lightmark

fbshipit-source-id: 6a675b3
2016-10-28 18:24:14 -07:00
Siying Dong
04751d5345 L0 compression should follow options.compression_per_level if not empty
Summary:
Currently, we don't use options.compression_per_level[0] as the compression style for L0 compression type, unless it is None. This behavior
 doesn't look like on purpose. This diff will make sure L0 compress using the style of options.compression_per_level[0].

Reviewed and accepted in: https://reviews.facebook.net/D65607
Closes https://github.com/facebook/rocksdb/pull/1435

Differential Revision: D4099368

Pulled By: siying

fbshipit-source-id: cfbbdcd
2016-10-28 17:39:20 -07:00
Andrew Kryczka
2946cadc46 Improve RangeDelAggregator documentation
Summary:
as requested in D62259
Closes https://github.com/facebook/rocksdb/pull/1434

Differential Revision: D4099047

Pulled By: ajkr

fbshipit-source-id: a258cfb
2016-10-28 15:54:21 -07:00
Islam AbdelRahman
0a9fd05c2a Update Vagrant file (test internal phabricator workflow)
Summary:
Add simple comment to Vagrant file
Closes https://github.com/facebook/rocksdb/pull/1433

Differential Revision: D4098740

Pulled By: IslamAbdelRahman

fbshipit-source-id: 4903bff
2016-10-28 15:39:19 -07:00
Islam AbdelRahman
fcd1e0bf6c Make rocksdb work with internal repo
fbshipit-source-id: f52d2b6d39668516270c51945fc4e1693e553ff7
2016-10-28 14:59:50 -07:00
Willem Jan Withagen
0aab5e55f0 FreeBSD: malloc_usable_size is in <malloc_np.h> (#1428)
Signed-off-by: Willem Jan Withagen <wjw@digiware.nl>
2016-10-28 10:44:52 -07:00
Kefu Chai
9c0bb7f172 cmake: drop "-march=native" from CXX_FLAGS (#1429)
this breaks the cross-compiling, and we can not assume that the building
machine and the target machine share the same CPU spec.

Signed-off-by: Kefu Chai <kchai@redhat.com>
2016-10-28 10:40:47 -07:00
Kien-hung Li
eeb27e1bbd Add handy option to turn on direct I/O in db_bench (#1424) 2016-10-28 10:36:05 -07:00
Jan Doms
c6168d13ab removed some declarations from c.h which resulted in undefined symbols (#1407) 2016-10-28 10:33:49 -07:00
Aaron Gao
bc429de490 revert fractional cascading in farward iterator
Summary: As offline discussion with Siying, revert this since it has bug with seek.

Test Plan: make check -j64

Reviewers: yiwu, andrewkr, sdong

Reviewed By: sdong

Subscribers: andrewkr, dhruba, leveldb

Differential Revision: https://reviews.facebook.net/D65559
2016-10-28 10:25:39 -07:00
Andrew Kryczka
b9bc7a2aa4 Use skiplist rep for range tombstone memtable
Summary: somehow missed committing this update in D62217

Test Plan: make check

Reviewers: sdong

Reviewed By: sdong

Subscribers: andrewkr, dhruba, leveldb

Differential Revision: https://reviews.facebook.net/D65361
2016-10-27 10:07:28 -07:00
Kefu Chai
60a2bbba94 Makefile: generate util/build_version.cc from .in file (#1384)
* util/build_verion.cc.in: add this file, so cmake and make can share the
  template file for generating util/build_version.cc.
* CMakeLists.txt: also, cmake v2.8.11 does not support file(GENERATE ...),
  so we are using configure_file() for creating build_version.cc.
* Makefile: use util/build_verion.cc.in for creating build_version.cc.

Signed-off-by: Kefu Chai <tchaikov@gmail.com>
2016-10-25 11:31:39 -07:00
Siying Dong
9ee84067f6 Disable DBTest.RepeatedWritesToSameKey (#1420)
Summary:
The verification condition of the test DBTest.RepeatedWritesToSameKey doesn't hold anymore after 3ce3bb3da2.
Disable the test for now before we find a way to replace it.

Test Plan: Run the test and make sure it is disabled.
2016-10-25 10:23:50 -07:00
sdong
f41df3045c OptionChangeMigration() to support FIFO compaction
Summary: OptionChangeMigration() to support FIFO compaction. If the DB before migration is using FIFO compaction, nothing should be done. If the desitnation option is FIFO options, compact to one single L0 file if the source has more than one levels.

Test Plan: Run option_change_migration_test

Reviewers: andrewkr, IslamAbdelRahman

Reviewed By: IslamAbdelRahman

Subscribers: leveldb, andrewkr, dhruba

Differential Revision: https://reviews.facebook.net/D65289
2016-10-24 18:04:32 -07:00
Anirban Rahut
2e8004e608 Changing the legocastle run to use valgrind_test instead of _check
Summary:
valgrind_test is the correct way to run valgrind tests.
this is becasue we need to force DISABLE_JEMALLOC

Test Plan: Running sandcastle and contrun

Reviewers: IslamAbdelRahman

Reviewed By: IslamAbdelRahman

Subscribers: andrewkr, dhruba

Differential Revision: https://reviews.facebook.net/D65451
2016-10-24 16:23:19 -07:00
Aaron Gao
9de2f75216 revert Prev() in MergingIterator to use previous code in non-prefix-seek mode
Summary: Siying suggested to keep old code for normal mode prev() for safety

Test Plan: make check -j64

Reviewers: yiwu, andrewkr, sdong

Reviewed By: sdong

Subscribers: andrewkr, dhruba, leveldb

Differential Revision: https://reviews.facebook.net/D65439
2016-10-24 13:13:01 -07:00
sdong
24495186da DBSSTTest.RateLimitedDelete: not to use real clock
Summary: Using real clock causes failures of DBSSTTest.RateLimitedDelete in some cases. Turn away from the real time. Use fake time instead.

Test Plan: Run the tests and all existing tests.

Reviewers: yiwu, IslamAbdelRahman

Reviewed By: IslamAbdelRahman

Subscribers: leveldb, andrewkr, dhruba

Differential Revision: https://reviews.facebook.net/D65145
2016-10-24 10:35:00 -07:00
sdong
1168cb810a Fix a bug that may cause a deleted row to appear again
Summary:
The previous fix of reappearing of a deleted row 0ce258f9b3 missed a corner case, which can be reproduced using test CompactionPickerTest.OverlappingUserKeys7. Consider such an example:

input level file: 1[B E] 2[F H]
output level file: 3[A C] 4[D I] 5[I K]

First file 2 is picked, which overlaps to file 4. 4 expands to 5. Now the all range is [D K] with 2 output level files. When we try to expand that, [D K] overlaps with file 1 and 2 in the input level, and 1 and 2 overlaps with 3 and 4 in the output level. So we end up with picking 3 and 4 in the output level. Without expanding, it also has 2 files, so we determine the output level doesn't change, although they are the different two files.

The fix is to expand the output level files after we picked 3 and 4. In that case, there will be three output level files so we will abort the expanding.

I also added two unit tests related to marked_for_compaction and being_compacted. They have been passing though.

Test Plan: Run the new unit test, as well as all other tests.

Reviewers: andrewkr, IslamAbdelRahman

Reviewed By: IslamAbdelRahman

Subscribers: yoshinorim, leveldb, andrewkr, dhruba

Differential Revision: https://reviews.facebook.net/D65373
2016-10-24 09:49:07 -07:00
Edouard A
99c052a34f Fix integer overflow in GetL0ThresholdSpeedupCompaction (#1378) 2016-10-23 18:43:29 -07:00
Yueh-Hsuan Chiang
f83cd64c0b Fix a bug that mistakenly disable regression_test.sh to update commit (#1415)
Summary:
Fix a bug that mistakenly disable regression_test.sh to update commit

Test Plan:
regression_test.sh
2016-10-21 17:26:24 -07:00
Anirban Rahut
0e926b84fd Passing DISABLE_JEMALLOC=1 to valgrind_check if run locally
Summary:
Valgrind does not work well with JEMALLOC. If you run
a simple make valgrind_check, you will see lots of issues and
crashes. When precommit runs, this is taken care of. Here we
make sure valgrind_check is passed in DISABLE_JEMALLOC=1

Test Plan: Ran local valgrind_test and noticed the difference

Reviewers: IslamAbdelRahman

Reviewed By: IslamAbdelRahman

Subscribers: andrewkr, dhruba

Differential Revision: https://reviews.facebook.net/D65379
2016-10-21 14:57:44 -07:00
Reid Horuff
4dfaa6610a Make IsDeadlockDetect() virtual member of Transaction
Summary: Make `IsDeadlockDetect()` virtual member of base class `Transaction` for ease of use in MyRocks

Test Plan: compiles. compiles into MyRocks call-site.

Reviewers: mung

Reviewed By: mung

Subscribers: andrewkr, dhruba

Differential Revision: https://reviews.facebook.net/D65385
2016-10-21 14:47:59 -07:00
Aaron Gao
59a7c0337b Change ioptions to store user_comparator, fix bug
Summary:
change ioptions.comparator to user_comparator instread of internal_comparator.
Also change Comparator* to InternalKeyComparator* to make its type explicitly.

Test Plan: make all check -j64

Reviewers: andrewkr, sdong, yiwu

Reviewed By: yiwu

Subscribers: andrewkr, dhruba, leveldb

Differential Revision: https://reviews.facebook.net/D65121
2016-10-21 11:31:42 -07:00
Islam AbdelRahman
869ae5d786 Support IngestExternalFile (remove AddFile restrictions)
Summary:
Changes in the diff

API changes:
- Introduce IngestExternalFile to replace AddFile (I think this make the API more clear)
- Introduce IngestExternalFileOptions (This struct will encapsulate the options for ingesting the external file)
- Deprecate AddFile() API

Logic changes:
- If our file overlap with the memtable we will flush the memtable
- We will find the first level in the LSM tree that our file key range overlap with the keys in it
- We will find the lowest level in the LSM tree above the the level we found in step 2 that our file can fit in and ingest our file in it
- We will assign a global sequence number to our new file
- Remove AddFile restrictions by using global sequence numbers

Other changes:
- Refactor all AddFile logic to be encapsulated in ExternalSstFileIngestionJob

Test Plan:
unit tests (still need to add more)
addfile_stress (https://reviews.facebook.net/D65037)

Reviewers: yiwu, andrewkr, lightmark, yhchiang, sdong

Reviewed By: sdong

Subscribers: jkedgar, hcz, andrewkr, dhruba

Differential Revision: https://reviews.facebook.net/D65061
2016-10-20 17:05:32 -07:00
sdong
1d9dbef64e Restrict running condition of UniversalCompactionTrivialMoveTest2
Summary: DBTestUniversalCompaction.UniversalCompactionTrivialMoveTest2 verifies non-trivial move is not triggered if we load data in sequential order. However, if there are multiple compaction threads, this conditon may not hold. Restrict the running condition to 1 compaction thread to make the test more robust.

Test Plan: Run the test and make sure at least it doesn't regress normally.

Reviewers: yhchiang, andrewkr, IslamAbdelRahman

Reviewed By: IslamAbdelRahman

Subscribers: leveldb, andrewkr, dhruba

Differential Revision: https://reviews.facebook.net/D65277
2016-10-20 15:43:00 -07:00
Manuel Ung
4edd39fda2 Implement deadlock detection
Summary: Implement deadlock detection. This is done by maintaining a TxnID -> TxnID map which represents the edges in the wait for graph (this is named `wait_txn_map_`).

Test Plan: transaction_test

Reviewers: IslamAbdelRahman, sdong

Reviewed By: sdong

Subscribers: andrewkr, dhruba

Differential Revision: https://reviews.facebook.net/D64491
2016-10-19 19:45:57 -07:00
Adam Retter
48fd619a47 Minor fixes to RocksJava Native Library initialization (#1287)
* [bugfix] Make sure the Native Library is initialized. Closes https://github.com/facebook/rocksdb/issues/989

* [bugfix] Just load the native libraries once
2016-10-19 18:21:22 -07:00
yiwu-arbug
48e4e842b7 Disable auto compactions in memory_test and re-enable the test (#1408)
Summary: Auto-compactions will change memory usage of DB but memory_test
didn't take it into account. This PR disable auto compactions in the
test and hopefully it fixes its flakyness.

Test Plan:
UBSAN build used to catch the flakyness. Run `make ubsan_check` and it
passes.
2016-10-19 18:18:42 -07:00
sdong
fb2e412943 column_family_test: disable some tests in LITE
Summary: Some tests in column_family_test depend on functions that are not available in LITE build, which sometimes cause flakiness. Disable them.

Test Plan: Run those tests in LITE build.

Reviewers: yiwu, IslamAbdelRahman

Reviewed By: IslamAbdelRahman

Subscribers: leveldb, andrewkr, dhruba

Differential Revision: https://reviews.facebook.net/D65271
2016-10-19 15:55:56 -07:00
Aaron Gao
5af651db24 fix data race in compact_files_test
Summary: fix data race

Test Plan: compact_files_test

Reviewers: sdong, yiwu, andrewkr

Reviewed By: andrewkr

Subscribers: andrewkr, dhruba, leveldb

Differential Revision: https://reviews.facebook.net/D65259
2016-10-19 13:37:51 -07:00
Andrew Kryczka
a0ba0aa877 Fix uninitialized variable gcc error for MyRocks
Summary: make sure seq_ is properly initialized even if ParseInternalKey() fails.

Test Plan: run myrocks release tests

Reviewers: lightmark, mung, sdong

Reviewed By: sdong

Subscribers: andrewkr, dhruba, leveldb

Differential Revision: https://reviews.facebook.net/D65199
2016-10-19 10:59:46 -07:00
Islam AbdelRahman
b88f8e87c5 Support SST files with Global sequence numbers [reland]
Summary:
reland https://reviews.facebook.net/D62523

- Update SstFileWriter to include a property for a global sequence number in the SST file `rocksdb.external_sst_file.global_seqno`
- Update TableProperties to be aware of the offset of each property in the file
- Update BlockBasedTableReader and Block to be able to honor the sequence number in `rocksdb.external_sst_file.global_seqno` property and use it to overwrite all sequence number in the file

Something worth mentioning is that we don't update the seqno in the index block since and when doing a binary search, the reason for that is that it's guaranteed that SST files with global seqno will have only one user_key and each key will have seqno=0 encoded in it, This mean that this key is greater than any other key with seqno> 0. That mean that we can actually keep the current logic for these blocks

Test Plan: unit tests

Reviewers: sdong, yhchiang

Subscribers: andrewkr, dhruba

Differential Revision: https://reviews.facebook.net/D65211
2016-10-18 16:59:37 -07:00
Aaron Gao
08616b4933 [db_bench] add filldeterministic (Universal+level compaction)
Summary:
in db_bench, we can dynamically create a rocksdb database that guarantees the shape of its LSM.
universal + level compaction
no fifo compaction
no multi db support

Test Plan:
./db_bench -benchmarks=fillseqdeterministic -compaction_style=1 -num_levels=3 --disable_auto_compactions -num=1000000 -value_size=1000
```
---------------------- LSM ---------------------
Level[0]: /000480.sst(size: 35060275 bytes)
Level[0]: /000479.sst(size: 70443197 bytes)
Level[0]: /000478.sst(size: 141600383 bytes)
Level[1]: /000341.sst - /000475.sst(total size: 284726629 bytes)
Level[2]: /000071.sst - /000340.sst(total size: 568649806 bytes)
fillseqdeterministic :      60.447 micros/op 16543 ops/sec;   16.0 MB/s
```

Reviewers: sdong, andrewkr, IslamAbdelRahman, yhchiang

Reviewed By: yhchiang

Subscribers: andrewkr, dhruba, leveldb

Differential Revision: https://reviews.facebook.net/D63111
2016-10-18 16:30:57 -07:00
Aaron Gao
52c9808c3a not split file in compaciton on level 0
Summary: we should not split file on level 0 in compaction because it will fail the following verification of seqno order on level 0

Test Plan: check with filldeterministic in db_bench

Reviewers: yhchiang, andrewkr

Reviewed By: andrewkr

Subscribers: andrewkr, dhruba, leveldb

Differential Revision: https://reviews.facebook.net/D65193
2016-10-18 16:30:34 -07:00
Aaron Gao
5e0d6b4cc9 fix db_stress assertion failure
Summary: in rocksdb::DBIter::FindValueForCurrentKey(), last_not_merge_type could also be SingleDelete() which is omitted

Test Plan: db_iter_test

Reviewers: yhchiang, sdong

Reviewed By: sdong

Subscribers: andrewkr, dhruba, leveldb

Differential Revision: https://reviews.facebook.net/D65187
2016-10-18 16:07:10 -07:00
Yueh-Hsuan Chiang
ab53998372 Bump RocksDB version to 4.13 (#1405)
Summary:
Bump RocksDB version to 4.13

Test Plan:
unit tests

Reviewers: sdong, IslamAbdelRahman, andrewkr, lightmark

Subscribers: leveldb
2016-10-18 15:39:10 -07:00
sdong
b4d07123c4 SamePrefixTest.InDomainTest to clear the test directory before testing
Summary: SamePrefixTest.InDomainTest may fail if the previous run of some test cases in prefix_test fail.

Test Plan: Run the test

Reviewers: lightmark, yhchiang, IslamAbdelRahman

Reviewed By: IslamAbdelRahman

Subscribers: leveldb, andrewkr, dhruba

Differential Revision: https://reviews.facebook.net/D65163
2016-10-18 14:01:10 -07:00
Islam AbdelRahman
aa09d03381 Avoid calling GetDBOptions() inside GetFromBatchAndDB()
Summary:
MyRocks hit a regression, @mung generated perf reports showing that the reason is the cost of calling `GetDBOptions()` inside `GetFromBatchAndDB()`
This diff avoid calling `GetDBOptions` and use the `ImmutableDBOptions` instead

Test Plan: make check -j64

Reviewers: sdong, yiwu

Reviewed By: yiwu

Subscribers: andrewkr, dhruba, mung

Differential Revision: https://reviews.facebook.net/D65151
2016-10-18 13:19:26 -07:00
Andrew Kryczka
6fbe96baf8 Compaction Support for Range Deletion
Summary:
This diff introduces RangeDelAggregator, which takes ownership of iterators
provided to it via AddTombstones(). The tombstones are organized in a two-level
map (snapshot stripe -> begin key -> tombstone). Tombstone creation avoids data
copy by holding Slices returned by the iterator, which remain valid thanks to pinning.

For compaction, we create a hierarchical range tombstone iterator with structure
matching the iterator over compaction input data. An aggregator based on that
iterator is used by CompactionIterator to determine which keys are covered by
range tombstones. In case of merge operand, the same aggregator is used by
MergeHelper. Upon finishing each file in the compaction, relevant range tombstones
are added to the output file's range tombstone metablock and file boundaries are
updated accordingly.

To check whether a key is covered by range tombstone, RangeDelAggregator::ShouldDelete()
considers tombstones in the key's snapshot stripe. When this function is used outside of
compaction, it also checks newer stripes, which can contain covering tombstones. Currently
the intra-stripe check involves a linear scan; however, in the future we plan to collapse ranges
within a stripe such that binary search can be used.

RangeDelAggregator::AddToBuilder() adds all range tombstones in the table's key-range
to a new table's range tombstone meta-block. Since range tombstones may fall in the gap
between files, we may need to extend some files' key-ranges. The strategy is (1) first file
extends as far left as possible and other files do not extend left, (2) all files extend right
until either the start of the next file or the end of the last range tombstone in the gap,
whichever comes first.

One other notable change is adding release/move semantics to ScopedArenaIterator
such that it can be used to transfer ownership of an arena-allocated iterator, similar to
how unique_ptr is used for malloc'd data.

Depends on D61473

Test Plan: compaction_iterator_test, mock_table, end-to-end tests in D63927

Reviewers: sdong, IslamAbdelRahman, wanning, yhchiang, lightmark

Reviewed By: lightmark

Subscribers: andrewkr, dhruba, leveldb

Differential Revision: https://reviews.facebook.net/D62205
2016-10-18 12:04:56 -07:00
Siying Dong
257de78d9b Remove "-Xcheck:jni" from Java tests (#1402)
Summary:
Junit and our code generate lots of warning if "-Xcheck:jni" is on and force Travis to fail as the logs are too long.

Test Plan: "make jtest" and see the warnings go away.
2016-10-18 09:18:24 -04:00
Aaron Gao
d88dff4ef2 add seeforprev in history
Summary: update new feature in history and avoid breaking mongorocks

Test Plan: make check

Reviewers: sdong, yiwu, andrewkr

Reviewed By: andrewkr

Subscribers: andrewkr, dhruba, leveldb

Differential Revision: https://reviews.facebook.net/D64611
2016-10-17 15:34:13 -07:00
dhruba borthakur
5027dd17a7 Fix a minor bug in the ldb tool that was not selecting the specified (#1399)
column family for compaction.
2016-10-17 10:40:30 -07:00
Siying Dong
fea6fdd676 Fix @see in two Java functions (#1396) 2016-10-14 23:03:17 -07:00
Dmitri Smirnov
b1031d6c12 Remove function local statics that interfere with memory pooling (#1392) 2016-10-14 13:09:18 -07:00
Andrew Kryczka
f47054015d Handle WAL deletion when using avoid_flush_during_recovery
Summary:
Previously the WAL files that were avoided during recovery would never
be considered for deletion. That was because alive_log_files_ was only
populated when log files are created. This diff further populates
alive_log_files_ with existing log files that aren't flushed during recovery,
such that FindObsoleteFiles() can find them later.

Depends on D64053.

Test Plan: new unit test, verifies it fails before this change and passes after

Reviewers: sdong, IslamAbdelRahman, yiwu

Reviewed By: yiwu

Subscribers: leveldb, dhruba, andrewkr

Differential Revision: https://reviews.facebook.net/D64059
2016-10-14 12:59:51 -07:00